RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ARFGEF1Q9Y6D6 1849 aa2.75□□□□□ -1.97
SUB1-202ENST00000502453 SSX8Q7RTT4 187 aa2.75□□□□□ -1.97
SUB1-202ENST00000502453 CACFD1Q9UGQ2 172 aa2.75□□□□□ -1.97
SUB1-202ENST00000502453 CHCHD2Q9Y6H1 151 aaPredicted RBP2.75□□□□□ -1.97
SUB1-202ENST00000502453 AFDNP55196 1824 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 IGHV3OR16-10A0A075B7F0 116 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 GEMIN2O14893 280 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 PLA2G10O15496 165 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 HYPMO75409 117 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 SFT2D2O95562 160 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 CXCL1P09341 107 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 PLA2G2AP14555 144 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 SRP14P37108 136 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 TMEM258P61165 79 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 ZNF876PQ49A33 203 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 RPP25LQ8N5L8 163 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 RPL36ALQ969Q0 106 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 FGF22Q9HCT0 170 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 TRAV27A0A087WT01 109 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 TMEM262E9PQX1 116 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 CRYGAP11844 174 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 XP32Q5T750 250 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 ZC2HC1BQ5TFG8 222 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 ZNF660Q6AZW8 331 aaPredicted RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 DAND5Q8N907 189 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 MAL2Q969L2 176 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 AMELYQ99218 206 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 BANF2Q9H503 90 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 ZNF581Q9P0T4 197 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 ZNF492Q9P255 531 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 TP73-AS1Q9UF72 201 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 MYLKQ15746 1914 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 TRBV20-1A0A075B6N2 111 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 IGHV1-45A0A0A0MS14 117 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 C7orf66A4D0T2 115 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 FSHBP01225 129 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 TRGC1P0CF51 173 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 RPL22P35268 128 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 RPL30P62888 115 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 LINC00303Q3SY05 128 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 GUSBP11Q6P575 273 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 H1FXQ92522 213 aaKnown RBP2.74□□□□□ -1.97
SUB1-202ENST00000502453 RERGLQ9H628 205 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 MICAL3Q7RTP6 2002 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 DOCK4Q8N1I0 1966 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 RALGAPA2Q2PPJ7 1873 aa2.74□□□□□ -1.97
SUB1-202ENST00000502453 IGKV1D-43A0A0B4J1Z2 117 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 CXCL5P42830 114 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 RSPO1Q2MKA7 263 aaPredicted RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 FAM182AQ5T1J6 154 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 OR2T2Q6IF00 324 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 LINC01555Q8NAE3 123 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 LSM10Q969L4 123 aaKnown RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 RBMXL1Q96E39 390 aaKnown RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 PLA2G12AQ9BZM1 189 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 TMEM106BQ9NUM4 274 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 IGKV1-12A0A0C4DH73 117 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 IGLL5B9A064 214 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 TMEM250H0YL14 139 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 LTAP01374 205 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 IGKV1D-12P01611 117 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 ZNF883P0CG24 379 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 SNCAP37840 140 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 AAED1Q7RTV5 226 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 ZNF555Q8NEP9 628 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 RPS4Y2Q8TD47 263 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 GTSF1Q8WW33 167 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 TOMM6Q96B49 74 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 TPRKBQ9Y3C4 175 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 CCDC88CQ9P219 2028 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 SCN11AQ9UI33 1791 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 COL11A2P13942 1736 aaPredicted RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 MEIS3P1A6NDR6 274 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 ZNF860A6NHJ4 632 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 IGKV1-39P01597 117 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 IGKV1D-39P04432 117 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 ZNF286BP0CG31 522 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 S100A4P26447 101 aaKnown RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 CSN1S1P47710 185 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 HINT1P49773 126 aaPredicted RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 GNB1P62873 340 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 KRTAP27-1Q3LI81 207 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 C22orf39Q6P5X5 142 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 C20orf203Q8NBC4 194 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 WFDC11Q8NEX6 87 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 OR4B1Q8NGF8 309 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 OR5D16Q8NGK9 328 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 BCORQ6W2J9 1755 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 PIKFYVEQ9Y2I7 2098 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 SLC25A14O95258 325 aaPredicted RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 QRFPP83859 136 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 MRPL54Q6P161 138 aaKnown RBP2.73□□□□□ -1.97
SUB1-202ENST00000502453 SCXQ7RTU7 201 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 LINC00305Q7Z4B0 112 aa2.73□□□□□ -1.97
SUB1-202ENST00000502453 SLC25A42Q86VD7 318 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms