RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 SRSF1Q07955 248 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDH8-202ENST00000377942 K7EM74 188 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 NDUFB8O95169 186 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 ZNF688P0C7X2 276 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 YPEL3P61236 119 aaPredicted RBP15.9■□□□□ 0.14
PCDH8-202ENST00000377942 CADP27708 2225 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 ORMDL2Q53FV1 153 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 TRGV4A0A0C4DH28 118 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 SHANK2-AS3Q9BTD1 123 aa15.9■□□□□ 0.14
PCDH8-202ENST00000377942 TRBV24-1A0A075B6N3 115 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 H3BVH4 76 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 C1orf122Q6ZSJ8 110 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 DDTP30046 118 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 LINC00518Q8N0U6 118 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 C1QTNF4Q9BXJ3 329 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 DENND4CQ5VZ89 1909 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 SHISA9B4DS77 424 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 ATP6V0E1O15342 81 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 IFI27P40305 119 aaPredicted RBP15.89■□□□□ 0.13
PCDH8-202ENST00000377942 UQCRFS1P47985 274 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 FOXL1Q12952 345 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCDH8-202ENST00000377942 PLXND1Q9Y4D7 1925 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 BDP1A6H8Y1 2624 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 HOXA5P20719 270 aa15.89■□□□□ 0.13
PCDH8-202ENST00000377942 ZGRF1Q86YA3 2104 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 LOC107984156A0A0G2JMH3 177 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 LCN12Q6JVE5 192 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 ARL17AQ8IVW1 177 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 ZNRD1Q9P1U0 126 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 DMRT1Q9Y5R6 373 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 LINC01551Q86U37 167 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 CR1LQ2VPA4 569 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 ATOH7Q8N100 152 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 KIF26AQ9ULI4 1882 aaPredicted RBP15.88■□□□□ 0.13
PCDH8-202ENST00000377942 RASL11AQ6T310 242 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 CYSLTR1Q9Y271 337 aa15.88■□□□□ 0.13
PCDH8-202ENST00000377942 DUX4L9Q6RFH8 374 aaPredicted RBP15.87■□□□□ 0.13
PCDH8-202ENST00000377942 SSBP4Q9BWG4 385 aaPredicted RBP15.87■□□□□ 0.13
PCDH8-202ENST00000377942 HBDP02042 147 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 PPIFP30405 207 aaKnown RBP15.87■□□□□ 0.13
PCDH8-202ENST00000377942 NDPQ00604 133 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 PSG3Q16557 428 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 TRAV8-6A0A0B4J262 113 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 H7C2G1 150 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 C8orf31Q8N9H6 132 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 VCX2Q9H322 139 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 BEX4Q9NWD9 120 aaPredicted RBP15.87■□□□□ 0.13
PCDH8-202ENST00000377942 C2orf16Q68DN1 1984 aa15.87■□□□□ 0.13
PCDH8-202ENST00000377942 ADMP35318 185 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 DTX2Q86UW9 622 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 DKK4Q9UBT3 224 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 SERF1AO75920 110 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 DMRTC2Q8IXT2 367 aaPredicted RBP15.86■□□□□ 0.13
PCDH8-202ENST00000377942 OVOL3O00110 214 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 SOD3P08294 240 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 SRRM4A7MD48 611 aaKnown RBP15.86■□□□□ 0.13
PCDH8-202ENST00000377942 LINC00614P0C842 121 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 MRAP2Q96G30 205 aa15.86■□□□□ 0.13
PCDH8-202ENST00000377942 MLANAQ16655 118 aa15.85■□□□□ 0.13
PCDH8-202ENST00000377942 GAGE10A6NGK3 116 aa15.85■□□□□ 0.13
PCDH8-202ENST00000377942 TTC9CQ8N5M4 171 aa15.85■□□□□ 0.13
PCDH8-202ENST00000377942 PRDM13Q9H4Q3 707 aa15.85■□□□□ 0.13
PCDH8-202ENST00000377942 ZNF415Q09FC8 603 aa15.85■□□□□ 0.13
PCDH8-202ENST00000377942 C1QL4Q86Z23 238 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 CHCHD1Q96BP2 118 aaKnown RBP15.84■□□□□ 0.13
PCDH8-202ENST00000377942 CREBBPQ92793 2442 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 LINC01559Q495D7 138 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 FAM19A2Q8N3H0 131 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 NRN1Q9NPD7 142 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 COTL1Q14019 142 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 FCN3O75636 299 aa15.84■□□□□ 0.13
PCDH8-202ENST00000377942 PLXNB3Q9ULL4 1909 aa15.83■□□□□ 0.13
PCDH8-202ENST00000377942 RCHY1Q96PM5 261 aa15.83■□□□□ 0.13
PCDH8-202ENST00000377942 A0A1W2PNU3 283 aaPredicted RBP15.83■□□□□ 0.12
PCDH8-202ENST00000377942 IGHV2-70P01814 119 aa15.83■□□□□ 0.12
PCDH8-202ENST00000377942 DPH3Q96FX2 82 aa15.83■□□□□ 0.12
PCDH8-202ENST00000377942 REG4Q9BYZ8 158 aa15.83■□□□□ 0.12
PCDH8-202ENST00000377942 POU2AF1Q16633 256 aa15.83■□□□□ 0.12
PCDH8-202ENST00000377942 SMIM12Q96EX1 92 aa15.83■□□□□ 0.12
PCDH8-202ENST00000377942 CA1P00915 261 aaPredicted RBP15.82■□□□□ 0.12
PCDH8-202ENST00000377942 CNTFRP26992 372 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 SYNJ2BPP57105 145 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 KLF2Q9Y5W3 355 aaPredicted RBP15.82■□□□□ 0.12
PCDH8-202ENST00000377942 YLPM1P49750 1951 aaKnown RBP15.82■□□□□ 0.12
PCDH8-202ENST00000377942 C1orf194Q5T5A4 169 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 Q6ZSR3 168 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 MAPK1IP1LQ8NDC0 245 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 INSP01308 110 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 KRTAP27-1Q3LI81 207 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 ACTL10Q5JWF8 245 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 PRADC1Q9BSG0 188 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 LIME1Q9H400 295 aa15.82■□□□□ 0.12
PCDH8-202ENST00000377942 IGHV2-5P01817 119 aa15.81■□□□□ 0.12
PCDH8-202ENST00000377942 WFDC12Q8WWY7 111 aa15.81■□□□□ 0.12
PCDH8-202ENST00000377942 CFAP161Q6P656 301 aa15.81■□□□□ 0.12
PCDH8-202ENST00000377942 C11orf53Q8IXP5 236 aa15.81■□□□□ 0.12
PCDH8-202ENST00000377942 IGKV1-39P01597 117 aa15.81■□□□□ 0.12
PCDH8-202ENST00000377942 IGKV1D-39P04432 117 aa15.81■□□□□ 0.12
PCDH8-202ENST00000377942 SH2D1AO60880 128 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms