RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 UBE2E1P51965 193 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 Q6P435 159 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 C14orf178Q8N769 122 aaPredicted RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 NKAPP1Q8N9T2 125 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 LOC105371267A0A1B0GV96 52 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 DAD1P61803 113 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 ZNF362Q5T0B9 420 aaPredicted RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 GFI1Q99684 422 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 IGKV1-27A0A075B6S5 117 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 SYS1-DBNDD2H3BUS1 97 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 PSPNO60542 156 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 IGKV1-5P01602 117 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 ESDP10768 282 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 NDPQ00604 133 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 BRD3OSQ6XYD6 125 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 Q6ZS92 163 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 FOXL2NBQ6ZUU3 175 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 F5P12259 2224 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 SOCS3O14543 225 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 MSMBP08118 114 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 FXYD7P58549 80 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 YPEL3P61236 119 aaPredicted RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 SRSF2Q01130 221 aaKnown RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 ATRAIDQ6UW56 229 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 I3L3M4 83 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 RNASE2P10153 161 aaKnown RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 GLRX5Q86SX6 157 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 ZNF48Q96MX3 618 aaPredicted RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 TMEM126AQ9H061 195 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 NCOR1P1Q9H4R4 102 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 PNRC2Q9NPJ4 139 aaKnown RBP5.26□□□□□ -1.57
UPF2-201ENST00000356352 CYTL1Q9NRR1 136 aa5.26□□□□□ -1.57
UPF2-201ENST00000356352 ARID2Q68CP9 1835 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 SAA4P35542 130 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 UBE2E2Q96LR5 201 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 SCN10AQ9Y5Y9 1956 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 TRAV8-3A0A0A6YYJ7 113 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 GAGE2AQ6NT46 116 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 Q8TCH9 128 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 CCDC88CQ9P219 2028 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 LOC285556D6RIA3 1793 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 IGKV1D-17A0A075B6S4 117 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 TRAV3A0A0B4J244 114 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 PRSS46E5RG02 174 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 EFNA2O43921 213 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 GAS1P54826 345 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 RIPPLY3P57055 190 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 Q8TAT8 98 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 MSRB2Q9Y3D2 182 aa5.25□□□□□ -1.57
UPF2-201ENST00000356352 SCN8AQ9UQD0 1980 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 TRAV8-1A0A0A6YYK1 113 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 CXCL1P09341 107 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 LYL1P12980 280 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 PLXNA1Q9UIW2 1896 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 OVOL3O00110 214 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 CLPSP04118 112 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 PFN1P07737 140 aaKnown RBP5.24□□□□□ -1.57
UPF2-201ENST00000356352 DEFB130BP0DP73 79 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 DEFB130AP0DP74 79 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 SELLP14151 372 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 NTF4P34130 210 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 SYNJ2BPP57105 145 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 DEFB131AP59861 70 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 Q0VFX4 171 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 RPP25LQ8N5L8 163 aaKnown RBP5.24□□□□□ -1.57
UPF2-201ENST00000356352 THAP8Q8NA92 274 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 SPXQ9BT56 116 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 PMVKQ15126 192 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 UTF1Q5T230 341 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 Q8N8P6 123 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 BPESC1Q9GZL8 116 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 IGHV1-69DA0A0B4J2H0 117 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 LINC00473A8K010 186 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 C15orf62A8K5M9 175 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 COLCA2A8K830 154 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 IGHV1-69P01742 117 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 CFPP27918 469 aa5.24□□□□□ -1.57
UPF2-201ENST00000356352 BRCA1P38398 1863 aaKnown RBP5.24□□□□□ -1.57
UPF2-201ENST00000356352 TRBV20-1A0A075B6N2 111 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 A0A087WWL8 130 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 CD5LO43866 347 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 COL8A2P25067 703 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 MST1P26927 711 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 KIR3DS1Q14943 382 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 Q5PR19 223 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 SP5Q6BEB4 398 aaPredicted RBP5.23□□□□□ -1.57
UPF2-201ENST00000356352 F5H768 121 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 NDUFA4O00483 81 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 ARMS2P0C7Q2 107 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 B3GALT5-AS1P59052 145 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 ZC2HC1BQ5TFG8 222 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 OR11H6Q8NGC7 330 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 WNK3Q9BYP7 1800 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 C3orf79P0CE67 100 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 AZU1P20160 251 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 FOXG1P55316 489 aaPredicted RBP5.23□□□□□ -1.57
UPF2-201ENST00000356352 SLAQ13239 276 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 LHFPL4Q7Z7J7 247 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms