RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 LINC00315P59091 139 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 RPS11P62280 158 aaKnown RBP eCLIP2.62□□□□□ -1.99
CCDC54-201ENST00000261058 DIAPH2-AS1Q14236 149 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 ABCA11PQ4W5N1 156 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 Q56UQ5 140 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 C9orf153Q5TBE3 101 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 ATP5L2Q7Z4Y8 100 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 FAM19A3Q7Z5A8 133 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 PRNTQ86SH4 94 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 MSRB3Q8IXL7 192 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 C10orf111Q8N326 155 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 TMEM75Q8N9X5 138 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 ZNF555Q8NEP9 628 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 OR10G2Q8NGC3 310 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 OR2T35Q8NGX2 323 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 VSTM2AQ8TAG5 236 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 MAL2Q969L2 176 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 MCEEQ96PE7 176 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 TBL1YQ9BQ87 522 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 SMDT1Q9H4I9 107 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 ST20Q9HBF5 79 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 TAAR3PQ9P1P4 343 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 LAMC1P11047 1609 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 ABCA5Q8WWZ7 1642 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 RGS12O14924 1447 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 LTN1O94822 1766 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 CUL7Q14999 1698 aa2.62□□□□□ -1.99
CCDC54-201ENST00000261058 CABIN1Q9Y6J0 2220 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 GLI3P10071 1580 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 CFTRP13569 1480 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 LRRC9Q6ZRR7 1453 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 NCKAP5O14513 1909 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 LOXHD1Q8IVV2 1947 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 TRAV19A0A0A6YYK7 116 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 TRBV7-6A0A0J9YX20 115 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 C3orf85A0A1B0GTC6 90 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 LRCOL1A6NCL2 159 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 APOC4-APOC2K7ER74 178 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 M0R2P5 195 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 LYRM1O43325 122 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 YPEL1O60688 119 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 FSTL3O95633 263 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 IGLV3-27P01718 113 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 APOC2P02655 101 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 SFTA3P0C7M3 94 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 PYYP10082 97 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 CRYGAP11844 174 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 SDC2P34741 201 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 EIF4EBP1Q13541 118 aaPredicted RBP2.61□□□□□ -1.99
CCDC54-201ENST00000261058 CST6Q15828 149 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 SLC25A34Q6PIV7 304 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 AAED1Q7RTV5 226 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 CYB561D1Q8N8Q1 229 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 OR8A1Q8NGG7 326 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 OTOSQ8NHW6 89 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 LMX1AQ8TE12 382 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 MUCL1Q96DR8 90 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 S100A16Q96FQ6 103 aaKnown RBP2.61□□□□□ -1.99
CCDC54-201ENST00000261058 C18orf15Q96N68 181 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 YPEL2Q96QA6 119 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 GPX7Q96SL4 187 aaPredicted RBP2.61□□□□□ -1.99
CCDC54-201ENST00000261058 OTORQ9NRC9 128 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 TMEM242Q9NWH2 141 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 ANAPC10Q9UM13 185 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 ARAP2Q8WZ64 1704 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 ABCA3Q99758 1704 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 TRPM3Q9HCF6 1732 aaPredicted RBP2.61□□□□□ -1.99
CCDC54-201ENST00000261058 MYO5CQ9NQX4 1742 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 BIVM-ERCC5R4GMW8 1640 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 SCN10AQ9Y5Y9 1956 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 TOPBP1Q92547 1522 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 CITO14578 2027 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 SCN4AP35499 1836 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 ATP7BP35670 1465 aa2.61□□□□□ -1.99
CCDC54-201ENST00000261058 NUP214P35658 2090 aaPredicted RBP2.61□□□□□ -1.99
CCDC54-201ENST00000261058 TSPOAP1O95153 1857 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 CCDC88AQ3V6T2 1871 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TRAV13-1A0A0B4J241 112 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TLCD2A6NGC4 264 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 A8MWV9 139 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 NDUFC2-KCTD14E9PQ53 114 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 PLA2G10O15496 165 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 SOCS1O15524 211 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 PITX3O75364 302 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 SNCGO76070 127 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 PROSCO94903 275 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 NDUFB6O95139 128 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TRACP01848 142 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 TRGC2P03986 189 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 FABP2P12104 132 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 SLC25A6P12236 298 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 RPL22P35268 128 aaKnown RBP2.6□□□□□ -1.99
CCDC54-201ENST00000261058 OPRM1P35372 400 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 KRTAP10-8P60410 259 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 QRFPP83859 136 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 MRPL2Q5T653 305 aaKnown RBP2.6□□□□□ -1.99
CCDC54-201ENST00000261058 Q5W150 140 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 GUSBP11Q6P575 273 aa2.6□□□□□ -1.99
CCDC54-201ENST00000261058 C22orf39Q6P5X5 142 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms