RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Vamp2P63044 116 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Fthl17fQ3SXD2 176 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ctf1Q60753 203 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zfp420Q7TMN8 578 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gpr137Q80ZU9 396 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Inpp5kQ8C5L6 468 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 GcaQ8VC88 220 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mob3bQ8VE04 216 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr38Q8VGP4 317 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr641Q8VGX6 312 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rwdd3Q8VIL2 267 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr702Q920Z2 318 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 H2afb1Q9CQ70 111 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pttg1Q9CQJ7 199 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zfand6Q9DCH6 223 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv5-17A0A075B5R1 117 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv1-36A0A0A6YXT2 117 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Kcnk15B2RVL1 343 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rpl27aP14115 148 aaKnown RBP7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rab7aP51150 207 aaKnown RBP7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sesn1P58006 492 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gabra1P62812 455 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Q08AU9 97 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 MENTQ569E4 350 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Foxf1Q61080 378 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Krt33bQ61897 404 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tle4Q62441 773 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Slc22a27Q76M72 551 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Znrd1Q791N7 123 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Q80W69 301 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Nmes1Q810Q5 83 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gpr4Q8BUD0 365 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rpp21Q8R040 150 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Nup35Q8R4R6 325 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cyyr1Q8VIH7 165 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 NanpQ9CPT3 248 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Fbxo36Q9CQ24 188 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rer1Q9CQU3 196 aaKnown RBP7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ssbp3Q9D032 388 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 H2al3Q9D4U4 128 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Bex3Q9WTZ9 124 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tcrg-V5A0A0G2JGV5 113 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Igsf23B2RTN2 239 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm45692D3Z0A0 150 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm4778L7N229 365 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 P04940 107 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 P04941 107 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1148Q7TR35 314 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr58Q7TRF6 309 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 PigmQ8C2R7 423 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 SbsnQ8CIT9 700 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Asb13Q8VBX0 278 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tmprss11dQ8VHK8 417 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 1700029F12RikQ9CRB4 147 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 St6galnac3Q9WUV2 305 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Slc22a5Q9Z0E8 557 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm6526G3X9Q9 198 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1329L7MTV4 313 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ninj1O70131 152 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 CapgP24452 352 aaKnown RBP7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rpl12P35979 165 aaKnown RBP7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mmp9P41245 730 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Plscr4P58196 326 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tcf7Q00417 419 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zic4Q61467 341 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Bud31Q6PGH1 103 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1385Q7TQT1 309 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Znf2Q8BIQ3 427 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lyrm2Q8R033 88 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Dolpp1Q9JMF7 238 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Trex2Q9R1A9 236 aa7.12□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm14692A2BH01 229 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm12790B1AUV6 201 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm14408E9Q6B9 136 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm20830J3KML6 227 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rab33bO35963 229 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tmem40Q4FJU9 225 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Psg16Q8K0U8 395 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Foxn4Q8K3Q3 521 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pcgf1Q8R023 259 aaKnown RBP7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr794Q8VF26 320 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Galnt11Q921L8 608 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ear10Q923L6 156 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Stoml2Q99JB2 353 aaKnown RBP7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hdhd3Q9CYW4 251 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rep15Q9D7T1 230 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lelp1Q9DAE3 120 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr943Q9EQ92 314 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 PbkQ9JJ78 330 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ap4m1Q9JKC7 449 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Usp9xP70398 2559 aaKnown RBP7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mast4Q811L6 2618 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Trav7n-5A0A075B604 112 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 TfpiO54819 306 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Svs5P30933 122 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hmx3P42581 356 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm773Q3TML4 206 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm20816Q5FWD4 227 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Reep5Q60870 185 aa7.11□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tgfbr1Q64729 503 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms