Protein–RNA interactions for Protein: L7N229

Gm4778, Predicted gene 4778, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4778L7N229 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Gm4778L7N229 Gm25239-201ENSMUST00000174915 86 ntBASIC27.86■■■□□ 2.05
Gm4778L7N229 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Gm4778L7N229 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Gm4778L7N229 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Gm4778L7N229 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Gm4778L7N229 Psd-208ENSMUST00000224556 2034 ntBASIC26.78■■□□□ 1.88
Gm4778L7N229 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Gm4778L7N229 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm4778L7N229 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Gm4778L7N229 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Gm4778L7N229 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Gm4778L7N229 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Gm4778L7N229 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm4778L7N229 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Gm4778L7N229 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Gm4778L7N229 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Gm4778L7N229 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
Gm4778L7N229 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Gm4778L7N229 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Gm4778L7N229 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm4778L7N229 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
Gm4778L7N229 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.87■■□□□ 1.57
Gm4778L7N229 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm4778L7N229 Gm15042-201ENSMUST00000120212 883 ntBASIC24.8■■□□□ 1.56
Gm4778L7N229 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Gm4778L7N229 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm4778L7N229 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm4778L7N229 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Gm4778L7N229 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Gm4778L7N229 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm4778L7N229 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm4778L7N229 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.4■■□□□ 1.5
Gm4778L7N229 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm4778L7N229 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.31■■□□□ 1.48
Gm4778L7N229 Gm15045-201ENSMUST00000117359 883 ntBASIC24.27■■□□□ 1.48
Gm4778L7N229 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm4778L7N229 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.19■■□□□ 1.46
Gm4778L7N229 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Gm4778L7N229 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Gm4778L7N229 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm4778L7N229 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Gm4778L7N229 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.03■■□□□ 1.44
Gm4778L7N229 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.03■■□□□ 1.44
Gm4778L7N229 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Gm4778L7N229 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm4778L7N229 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm4778L7N229 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Gm4778L7N229 Gm24109-201ENSMUST00000175489 103 ntBASIC23.9■■□□□ 1.42
Gm4778L7N229 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.9■■□□□ 1.42
Gm4778L7N229 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm4778L7N229 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Gm4778L7N229 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Gm4778L7N229 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Gm4778L7N229 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Gm4778L7N229 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Gm4778L7N229 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Gm4778L7N229 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm4778L7N229 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gm4778L7N229 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.64■■□□□ 1.37
Gm4778L7N229 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Gm4778L7N229 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm4778L7N229 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Gm4778L7N229 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Gm4778L7N229 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Gm4778L7N229 Gm23366-201ENSMUST00000175022 89 ntBASIC23.42■■□□□ 1.34
Gm4778L7N229 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Gm4778L7N229 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm4778L7N229 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.31■■□□□ 1.32
Gm4778L7N229 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm4778L7N229 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm4778L7N229 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm4778L7N229 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm4778L7N229 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Gm4778L7N229 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm4778L7N229 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm4778L7N229 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Gm4778L7N229 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm4778L7N229 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm4778L7N229 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm4778L7N229 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gm4778L7N229 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.12■■□□□ 1.29
Gm4778L7N229 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.11■■□□□ 1.29
Gm4778L7N229 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm4778L7N229 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm4778L7N229 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm4778L7N229 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.05■■□□□ 1.28
Gm4778L7N229 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Gm4778L7N229 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.02■■□□□ 1.28
Gm4778L7N229 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Gm4778L7N229 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm4778L7N229 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm4778L7N229 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Gm4778L7N229 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm4778L7N229 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm4778L7N229 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm4778L7N229 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm4778L7N229 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Gm4778L7N229 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gm4778L7N229 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms