RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W VPS24P36095 224 aaKnown RBP2.82□□□□□ -1.96
BRO1YPL084W FUI1P38196 639 aa2.82□□□□□ -1.96
BRO1YPL084W CHS7P38843 316 aa2.82□□□□□ -1.96
BRO1YPL084W NDC80P40460 691 aa2.82□□□□□ -1.96
BRO1YPL084W SLI1P53304 468 aa2.82□□□□□ -1.96
BRO1YPL084W SMX3P54999 86 aaPredicted RBP2.82□□□□□ -1.96
BRO1YPL084W YSH1Q06224 779 aaPredicted RBP2.82□□□□□ -1.96
BRO1YPL084W ARR3Q06598 404 aa2.82□□□□□ -1.96
BRO1YPL084W BRE1Q07457 700 aaKnown RBP2.82□□□□□ -1.96
BRO1YPL084W SEC12P11655 471 aa2.81□□□□□ -1.96
BRO1YPL084W VPS33P20795 691 aa2.81□□□□□ -1.96
BRO1YPL084W APL3P38065 1025 aa2.81□□□□□ -1.96
BRO1YPL084W UBS1P38290 277 aa2.81□□□□□ -1.96
BRO1YPL084W LRO1P40345 661 aa2.81□□□□□ -1.96
BRO1YPL084W PAP2P53632 584 aaKnown RBP2.81□□□□□ -1.96
BRO1YPL084W ACS1Q01574 713 aa2.81□□□□□ -1.96
BRO1YPL084W TIM44Q01852 431 aa2.81□□□□□ -1.96
BRO1YPL084W VMS1Q04311 632 aaKnown RBP2.81□□□□□ -1.96
BRO1YPL084W TRI1Q05024 226 aa2.81□□□□□ -1.96
BRO1YPL084W HBT1Q07653 1046 aaKnown RBP2.81□□□□□ -1.96
BRO1YPL084W PHO81P17442 1178 aa2.81□□□□□ -1.96
BRO1YPL084W APM3P38153 483 aa2.81□□□□□ -1.96
BRO1YPL084W YJL193WP39542 402 aa2.81□□□□□ -1.96
BRO1YPL084W ACA1P39970 489 aa2.81□□□□□ -1.96
BRO1YPL084W VPS27P40343 622 aaKnown RBP2.81□□□□□ -1.96
BRO1YPL084W ARG2P40360 574 aa2.81□□□□□ -1.96
BRO1YPL084W CTF4Q01454 927 aa2.81□□□□□ -1.96
BRO1YPL084W EFR3Q03653 782 aaKnown RBP2.81□□□□□ -1.96
BRO1YPL084W PNS1Q12412 539 aa2.81□□□□□ -1.96
BRO1YPL084W TRX2P22803 104 aaKnown RBP2.8□□□□□ -1.96
BRO1YPL084W DBF20P32328 564 aa2.8□□□□□ -1.96
BRO1YPL084W GLG1P36143 616 aa2.8□□□□□ -1.96
BRO1YPL084W MRPL7P36519 292 aa2.8□□□□□ -1.96
BRO1YPL084W STB5P38699 743 aa2.8□□□□□ -1.96
BRO1YPL084W RPT2P40327 437 aaKnown RBP2.8□□□□□ -1.96
BRO1YPL084W GSM1P42950 618 aa2.8□□□□□ -1.96
BRO1YPL084W UBA2P52488 636 aa2.8□□□□□ -1.96
BRO1YPL084W SPC98P53540 846 aa2.8□□□□□ -1.96
BRO1YPL084W GSF2Q04697 403 aaKnown RBP2.8□□□□□ -1.96
BRO1YPL084W LAM4P38800 1345 aa2.8□□□□□ -1.96
BRO1YPL084W DHR2P36009 735 aaPredicted RBP2.8□□□□□ -1.96
BRO1YPL084W GMH1P36125 273 aa2.8□□□□□ -1.96
BRO1YPL084W MOH1P38191 138 aa2.8□□□□□ -1.96
BRO1YPL084W IES5P40060 125 aa2.8□□□□□ -1.96
BRO1YPL084W YGR021WP53212 290 aa2.8□□□□□ -1.96
BRO1YPL084W SNF12P53628 566 aa2.8□□□□□ -1.96
BRO1YPL084W CEF1Q03654 590 aaPredicted RBP2.8□□□□□ -1.96
BRO1YPL084W UFO1Q04511 668 aa2.8□□□□□ -1.96
BRO1YPL084W RKI1Q12189 258 aa2.8□□□□□ -1.96
BRO1YPL084W PTH2P34222 208 aa2.79□□□□□ -1.96
BRO1YPL084W YLF2P38746 405 aa2.79□□□□□ -1.96
BRO1YPL084W STT3P39007 718 aaKnown RBP2.79□□□□□ -1.96
BRO1YPL084W MFM1Q02783 413 aa2.79□□□□□ -1.96
BRO1YPL084W HOF1Q05080 669 aa2.79□□□□□ -1.96
BRO1YPL084W POL3P15436 1097 aa2.79□□□□□ -1.96
BRO1YPL084W CAP1P28495 268 aaKnown RBP2.79□□□□□ -1.96
BRO1YPL084W DSS4P32601 143 aa2.79□□□□□ -1.96
BRO1YPL084W MRS6P32864 603 aaKnown RBP2.79□□□□□ -1.96
BRO1YPL084W YJL206CP39529 758 aa2.79□□□□□ -1.96
BRO1YPL084W SPC72P39723 622 aa2.79□□□□□ -1.96
BRO1YPL084W VFA1P40080 203 aa2.79□□□□□ -1.96
BRO1YPL084W SDS3P40505 327 aa2.79□□□□□ -1.96
BRO1YPL084W POL31P46957 487 aa2.79□□□□□ -1.96
BRO1YPL084W COS12P53053 380 aa2.79□□□□□ -1.96
BRO1YPL084W TRS23Q03784 219 aa2.79□□□□□ -1.96
BRO1YPL084W CRD1Q07560 283 aa2.79□□□□□ -1.96
BRO1YPL084W AAD4Q07747 329 aa2.79□□□□□ -1.96
BRO1YPL084W KIN3P22209 435 aa2.78□□□□□ -1.96
BRO1YPL084W MCM3P24279 971 aaKnown RBP2.78□□□□□ -1.96
BRO1YPL084W OAR1P35731 278 aa2.78□□□□□ -1.96
BRO1YPL084W THI6P41835 540 aa2.78□□□□□ -1.96
BRO1YPL084W CCT7P42943 550 aaKnown RBP2.78□□□□□ -1.96
BRO1YPL084W ENT2Q05785 613 aa2.78□□□□□ -1.96
BRO1YPL084W PHO5P00635 467 aa2.78□□□□□ -1.96
BRO1YPL084W MSM1P22438 575 aa2.78□□□□□ -1.96
BRO1YPL084W BDH2P39713 417 aa2.78□□□□□ -1.96
BRO1YPL084W ERR3P42222 437 aa2.78□□□□□ -1.96
BRO1YPL084W PMT6P42934 759 aa2.78□□□□□ -1.96
BRO1YPL084W GND2P53319 492 aa2.78□□□□□ -1.96
BRO1YPL084W DAK1P54838 584 aaKnown RBP2.78□□□□□ -1.96
BRO1YPL084W TMN2Q04562 672 aa2.78□□□□□ -1.96
BRO1YPL084W MRH1Q12117 320 aaPredicted RBP2.78□□□□□ -1.96
BRO1YPL084W TOP1P04786 769 aa2.77□□□□□ -1.97
BRO1YPL084W CTT1P06115 562 aa2.77□□□□□ -1.97
BRO1YPL084W STE4P18851 423 aa2.77□□□□□ -1.97
BRO1YPL084W CDC43P18898 376 aa2.77□□□□□ -1.97
BRO1YPL084W RPS7AP26786 190 aaKnown RBP2.77□□□□□ -1.97
BRO1YPL084W PRE2P30656 287 aaKnown RBP2.77□□□□□ -1.97
BRO1YPL084W MTH1P35198 433 aa2.77□□□□□ -1.97
BRO1YPL084W YIP4P53093 235 aa2.77□□□□□ -1.97
BRO1YPL084W TRS31Q03337 283 aa2.77□□□□□ -1.97
BRO1YPL084W ECM16Q04217 1267 aaKnown RBP2.77□□□□□ -1.97
BRO1YPL084W IWR1Q07532 353 aaPredicted RBP2.77□□□□□ -1.97
BRO1YPL084W YPL216WQ08964 1102 aa2.77□□□□□ -1.97
BRO1YPL084W BMS1Q08965 1183 aaKnown RBP2.77□□□□□ -1.97
BRO1YPL084W MIS1P09440 975 aaKnown RBP2.77□□□□□ -1.97
BRO1YPL084W BET2P20133 325 aa2.77□□□□□ -1.97
BRO1YPL084W SIR1P21691 654 aa2.77□□□□□ -1.97
BRO1YPL084W CPR6P53691 371 aaKnown RBP2.77□□□□□ -1.97
BRO1YPL084W BUD17P53727 317 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms