RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	ALR1	Q08269	859 aa		4.17	□□□□□ -1.74
SNF2	YOR290C	PUS7	Q08647	676 aa	Known RBP	4.17	□□□□□ -1.74
SNF2	YOR290C	RGS2	Q99188	309 aa		4.17	□□□□□ -1.74
SNF2	YOR290C	HMG1	P12683	1054 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	PRI2	P20457	528 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	RAD53	P22216	821 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	URA7	P28274	579 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	SMF1	P38925	575 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	RSP5	P39940	809 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	MXR1	P40029	184 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YER156C	P40093	338 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	ALD4	P46367	519 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	SIP4	P46954	829 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	MNP1	P53163	194 aa	Predicted RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	ATG16	Q03818	150 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	BUR2	Q05949	395 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	VAM6	Q07468	1049 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	SFM1	Q12314	213 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	MRPL8	P22353	238 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	ICL1	P28240	557 aa	Predicted RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	RIB5	P38145	238 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	DDI1	P40087	428 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	IDS2	P46958	469 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YJL043W	P47053	257 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	PRM1	P53835	661 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	UBX4	P54730	416 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	PRO2	P54885	456 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	PMT7	Q06644	662 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	PDH1	Q12428	516 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	SRP54	P20424	541 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	PRP21	P32524	280 aa	Predicted RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	YKU70	P32807	602 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	ECM4	P36156	370 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	DUG1	P43616	481 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	SRP1	Q02821	542 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	VPS38	Q05919	439 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	UTP21	Q06078	939 aa	Predicted RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	YLL007C	Q07799	665 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	NUR1	Q12066	484 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YOR114W	Q12219	294 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YOR214C	Q12282	236 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	MTR10	Q99189	972 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	COX6	P00427	148 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	PRP16	P15938	1071 aa	Predicted RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	PRP22	P24384	1145 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	TPS2	P31688	896 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	PYC2	P32327	1180 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	DIA4	P38705	446 aa	Predicted RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	TMA108	P40462	946 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	FIG4	P42837	879 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	RET2	P43621	546 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	CIN2	P46670	268 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	SNX4	P47057	423 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	RSM7	P47150	247 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	HXT16	P47185	567 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	RCM1	P53972	490 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YSA1	Q01976	231 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	RMT2	Q03305	412 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	TRS120	Q04183	1289 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YMR018W	Q04364	514 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	KAP95	Q06142	861 aa	Known RBP	4.16	□□□□□ -1.74
SNF2	YOR290C	FRE5	Q08908	694 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	AVL9	Q12500	764 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	MHF2	Q3E829	80 aa		4.16	□□□□□ -1.74
SNF2	YOR290C	YPT1	P01123	206 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
SNF2	YOR290C	NFT1	P0CE68	1218 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	NAT1	P12945	854 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	ADD66	P36040	267 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	EXO1	P39875	702 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	FTR1	P40088	404 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	IMA5	P40884	581 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	GLC8	P41818	229 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	MAD3	P47074	515 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	PTK2	P47116	818 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	ASI1	P54074	624 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	PEX29	Q03370	554 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	RIP-Chip
SNF2	YOR290C	AAD15	Q08361	143 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	FYV7	Q12247	151 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	YOR304C-A	O14468	76 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	TRL1	P09880	827 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	TUP1	P16649	713 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	RPL5	P26321	297 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	GDH2	P33327	1092 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	LSM12	P38828	187 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	PHM8	P40025	321 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	RPA43	P46669	326 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	FOL2	P51601	243 aa	Known RBP	4.15	□□□□□ -1.74
SNF2	YOR290C	YLR271W	Q06152	274 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	YPR127W	Q06494	345 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	YPL260W	Q08977	551 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	MAM3	Q12296	706 aa		4.15	□□□□□ -1.74
SNF2	YOR290C	PIF1	P07271	859 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	DBP5	P20449	482 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	SRP40	P32583	406 aa	Predicted RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	YKL063C	P35725	167 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	RDH54	P38086	958 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	MAP2	P38174	421 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 126.1 ms