RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ASP3-2P0CX77 362 aa7.64□□□□□ -1.19
RUP1YOR138C ASP3-3P0CX78 362 aa7.64□□□□□ -1.19
RUP1YOR138C ASP3-4P0CX79 362 aa7.64□□□□□ -1.19
RUP1YOR138C ASP3-1P0CZ17 362 aa7.64□□□□□ -1.19
RUP1YOR138C TAL1P15019 335 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C VMA2P16140 517 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C YDJ1P25491 409 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C YCR015CP25616 317 aa7.64□□□□□ -1.19
RUP1YOR138C SHU2P38957 223 aa7.64□□□□□ -1.19
RUP1YOR138C BEM4P39011 633 aa7.64□□□□□ -1.19
RUP1YOR138C SSP120P39931 234 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C MAM33P40513 266 aa7.64□□□□□ -1.19
RUP1YOR138C ASG7P46993 209 aa7.64□□□□□ -1.19
RUP1YOR138C YNL247WP53852 767 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C YMR209CQ03648 457 aa7.64□□□□□ -1.19
RUP1YOR138C YMR160WQ03823 816 aa7.64□□□□□ -1.19
RUP1YOR138C RKM2Q03942 479 aa7.64□□□□□ -1.19
RUP1YOR138C HMO1Q03973 246 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C YET2Q04210 160 aa7.64□□□□□ -1.19
RUP1YOR138C AIM39Q08223 395 aa7.64□□□□□ -1.19
RUP1YOR138C IMA2Q08295 589 aa7.64□□□□□ -1.19
RUP1YOR138C AAD15Q08361 143 aa7.64□□□□□ -1.19
RUP1YOR138C SLP1Q12232 587 aa7.64□□□□□ -1.19
RUP1YOR138C AVL9Q12500 764 aa7.64□□□□□ -1.19
RUP1YOR138C NOT5Q12514 560 aaPredicted RBP7.64□□□□□ -1.19
RUP1YOR138C MST1P07236 462 aa7.64□□□□□ -1.19
RUP1YOR138C MSD1P15179 658 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C TYR1P20049 452 aa7.64□□□□□ -1.19
RUP1YOR138C CYM1P32898 989 aa7.64□□□□□ -1.19
RUP1YOR138C SLA2P33338 968 aa7.64□□□□□ -1.19
RUP1YOR138C SIP2P34164 415 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C KES1P35844 434 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C RRP14P36080 434 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C MMS4P38257 691 aa7.64□□□□□ -1.19
RUP1YOR138C TSC10P38342 320 aa7.64□□□□□ -1.19
RUP1YOR138C PHO89P38361 574 aa7.64□□□□□ -1.19
RUP1YOR138C DIM1P41819 318 aaKnown RBP7.64□□□□□ -1.19
RUP1YOR138C TAN1P53072 289 aaPredicted RBP7.64□□□□□ -1.19
RUP1YOR138C PXR1P53335 271 aaPredicted RBP7.64□□□□□ -1.19
RUP1YOR138C ULP1Q02724 621 aa7.64□□□□□ -1.19
RUP1YOR138C YLL056CQ12177 298 aa7.64□□□□□ -1.19
RUP1YOR138C GPA2P10823 449 aa7.63□□□□□ -1.19
RUP1YOR138C SKG6P32900 734 aaPredicted RBP7.63□□□□□ -1.19
RUP1YOR138C SLI15P38283 698 aa7.63□□□□□ -1.19
RUP1YOR138C DIA4P38705 446 aaPredicted RBP7.63□□□□□ -1.19
RUP1YOR138C MGS1P40151 587 aa7.63□□□□□ -1.19
RUP1YOR138C RLP7P40693 322 aaKnown RBP7.63□□□□□ -1.19
RUP1YOR138C RPS7BP48164 190 aaKnown RBP7.63□□□□□ -1.19
RUP1YOR138C SLU7Q02775 382 aaKnown RBP7.63□□□□□ -1.19
RUP1YOR138C ARO80Q04052 950 aa7.63□□□□□ -1.19
RUP1YOR138C ADF1Q2V2Q1 113 aa7.63□□□□□ -1.19
RUP1YOR138C RPS9BP05755 195 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C URA10P30402 227 aa7.62□□□□□ -1.19
RUP1YOR138C MRP4P32902 394 aa7.62□□□□□ -1.19
RUP1YOR138C YBL036CP38197 257 aa7.62□□□□□ -1.19
RUP1YOR138C AVT2P39981 480 aa7.62□□□□□ -1.19
RUP1YOR138C YFL012WP43580 148 aa7.62□□□□□ -1.19
RUP1YOR138C POL31P46957 487 aa7.62□□□□□ -1.19
RUP1YOR138C PSP2P50109 593 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C MND1P53102 219 aa7.62□□□□□ -1.19
RUP1YOR138C COG2P53271 262 aa7.62□□□□□ -1.19
RUP1YOR138C SQS1P53866 767 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C CUE5Q08412 411 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C APC9Q12107 265 aa7.62□□□□□ -1.19
RUP1YOR138C DBP10Q12389 995 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C PRP6P19735 899 aaPredicted RBP7.62□□□□□ -1.19
RUP1YOR138C URA4P20051 364 aa7.62□□□□□ -1.19
RUP1YOR138C RPL5P26321 297 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C PRR1P28708 518 aa7.62□□□□□ -1.19
RUP1YOR138C SRB2P34162 210 aa7.62□□□□□ -1.19
RUP1YOR138C PDX3P38075 228 aaKnown RBP7.62□□□□□ -1.19
RUP1YOR138C GEM1P39722 662 aa7.62□□□□□ -1.19
RUP1YOR138C VAB2P40003 282 aa7.62□□□□□ -1.19
RUP1YOR138C NUT1P53114 1132 aa7.62□□□□□ -1.19
RUP1YOR138C MNP1P53163 194 aaPredicted RBP7.62□□□□□ -1.19
RUP1YOR138C TVP15Q03860 143 aa7.62□□□□□ -1.19
RUP1YOR138C TAF3Q12297 353 aa7.62□□□□□ -1.19
RUP1YOR138C RRP36Q12481 300 aaPredicted RBP7.62□□□□□ -1.19
RUP1YOR138C PCD1Q12524 340 aa7.62□□□□□ -1.19
RUP1YOR138C ENO1P00924 437 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C SBP1P10080 294 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C PUT4P15380 627 aa7.61□□□□□ -1.19
RUP1YOR138C VAC17P25591 423 aa7.61□□□□□ -1.19
RUP1YOR138C SPR1P32603 445 aa7.61□□□□□ -1.19
RUP1YOR138C RIM2P38127 377 aa7.61□□□□□ -1.19
RUP1YOR138C SLM4P38247 162 aa7.61□□□□□ -1.19
RUP1YOR138C RRN7P40992 514 aa7.61□□□□□ -1.19
RUP1YOR138C NUP84P52891 726 aa7.61□□□□□ -1.19
RUP1YOR138C ALT1P52893 592 aa7.61□□□□□ -1.19
RUP1YOR138C INA17Q02888 182 aa7.61□□□□□ -1.19
RUP1YOR138C SNX3Q08826 162 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C SGT2Q12118 346 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C VPS5Q92331 675 aa7.61□□□□□ -1.19
RUP1YOR138C MSB1P21339 1137 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C SAN1P22470 610 aa7.61□□□□□ -1.19
RUP1YOR138C VPH2P32341 215 aa7.61□□□□□ -1.19
RUP1YOR138C DPH2P32461 534 aa7.61□□□□□ -1.19
RUP1YOR138C SFB2P53953 876 aa7.61□□□□□ -1.19
RUP1YOR138C CWC21Q03375 135 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C ECM7Q06200 448 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms