RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W EUG1P32474 517 aa5.59□□□□□ -1.51
VAM3YOR106W LOT5P34234 306 aa5.59□□□□□ -1.51
VAM3YOR106W RIM13Q03792 727 aa5.59□□□□□ -1.51
VAM3YOR106W SEG1Q04279 960 aa5.59□□□□□ -1.51
VAM3YOR106W ARG7Q04728 441 aa5.59□□□□□ -1.51
VAM3YOR106W TGS1Q12052 315 aa5.59□□□□□ -1.51
VAM3YOR106W LRO1P40345 661 aa5.58□□□□□ -1.52
VAM3YOR106W TAX4P47030 604 aa5.58□□□□□ -1.52
VAM3YOR106W YDL183CP48569 320 aa5.58□□□□□ -1.52
VAM3YOR106W SPC105P53148 917 aa5.58□□□□□ -1.52
VAM3YOR106W CPA2P03965 1118 aaKnown RBP5.57□□□□□ -1.52
VAM3YOR106W YJL193WP39542 402 aa5.57□□□□□ -1.52
VAM3YOR106W NIT2P47016 307 aa5.57□□□□□ -1.52
VAM3YOR106W PEF1P53238 335 aa5.57□□□□□ -1.52
VAM3YOR106W MDR1P53258 950 aa5.57□□□□□ -1.52
VAM3YOR106W COQ6P53318 479 aa5.57□□□□□ -1.52
VAM3YOR106W ARR3Q06598 404 aa5.57□□□□□ -1.52
VAM3YOR106W YEL076C-AP0CX16 216 aa5.56□□□□□ -1.52
VAM3YOR106W YLR464WP0CX17 216 aa5.56□□□□□ -1.52
VAM3YOR106W SEC12P11655 471 aa5.56□□□□□ -1.52
VAM3YOR106W VPS33P20795 691 aa5.56□□□□□ -1.52
VAM3YOR106W GRX4P32642 244 aa5.56□□□□□ -1.52
VAM3YOR106W RMA1P36001 430 aaKnown RBP5.56□□□□□ -1.52
VAM3YOR106W YEL076CP39971 216 aa5.56□□□□□ -1.52
VAM3YOR106W GFD1Q04839 188 aaKnown RBP5.56□□□□□ -1.52
VAM3YOR106W WHI2P12611 486 aa5.55□□□□□ -1.52
VAM3YOR106W COX11P19516 300 aaKnown RBP5.55□□□□□ -1.52
VAM3YOR106W NUP1P20676 1076 aa5.55□□□□□ -1.52
VAM3YOR106W SLD3P53135 668 aa5.55□□□□□ -1.52
VAM3YOR106W RPS15Q01855 142 aaKnown RBP5.55□□□□□ -1.52
VAM3YOR106W AFT2Q08957 416 aa5.55□□□□□ -1.52
VAM3YOR106W VPS5Q92331 675 aa5.55□□□□□ -1.52
VAM3YOR106W AI5_ALPHAQ9ZZX1 630 aa5.55□□□□□ -1.52
VAM3YOR106W PGK1P00560 416 aaKnown RBP5.54□□□□□ -1.52
VAM3YOR106W RPL7AP05737 244 aaKnown RBP5.54□□□□□ -1.52
VAM3YOR106W HEM1P09950 548 aaPredicted RBP5.54□□□□□ -1.52
VAM3YOR106W PMA2P19657 947 aa5.54□□□□□ -1.52
VAM3YOR106W HOT13P36078 116 aa5.54□□□□□ -1.52
VAM3YOR106W YBR071WP38243 211 aa5.54□□□□□ -1.52
VAM3YOR106W IRC5P43610 853 aa5.54□□□□□ -1.52
VAM3YOR106W YNL018CP53976 612 aa5.54□□□□□ -1.52
VAM3YOR106W RPL7BQ12213 244 aaKnown RBP5.54□□□□□ -1.52
VAM3YOR106W TMA17Q12513 150 aa5.54□□□□□ -1.52
VAM3YOR106W PCK1P10963 549 aa5.53□□□□□ -1.52
VAM3YOR106W TSR4P25040 408 aa5.53□□□□□ -1.52
VAM3YOR106W CCL1P37366 393 aa5.53□□□□□ -1.52
VAM3YOR106W EMP65P40085 556 aa5.53□□□□□ -1.52
VAM3YOR106W CWC2Q12046 339 aaPredicted RBP5.53□□□□□ -1.52
VAM3YOR106W LEU2P04173 364 aaPredicted RBP5.52□□□□□ -1.53
VAM3YOR106W RNR3P21672 869 aaKnown RBP5.52□□□□□ -1.53
VAM3YOR106W CWH43P25618 953 aa5.52□□□□□ -1.53
VAM3YOR106W HOL1P53389 586 aa5.52□□□□□ -1.53
VAM3YOR106W MTD1Q02046 320 aaKnown RBP5.52□□□□□ -1.53
VAM3YOR106W ORM2Q06144 216 aa5.52□□□□□ -1.53
VAM3YOR106W YMR084WA2P2R3 262 aa5.51□□□□□ -1.53
VAM3YOR106W KAR1P11927 433 aa5.51□□□□□ -1.53
VAM3YOR106W DSS4P32601 143 aa5.51□□□□□ -1.53
VAM3YOR106W SNM1P40993 198 aa5.51□□□□□ -1.53
VAM3YOR106W PIP2P52960 996 aa5.51□□□□□ -1.53
VAM3YOR106W SAP4P53036 818 aa5.51□□□□□ -1.53
VAM3YOR106W USA1Q03714 838 aa5.51□□□□□ -1.53
VAM3YOR106W PEX15Q08215 383 aa5.51□□□□□ -1.53
VAM3YOR106W YOR378WQ08902 515 aa5.51□□□□□ -1.53
VAM3YOR106W BET2P20133 325 aa5.5□□□□□ -1.53
VAM3YOR106W APN1P22936 367 aa5.5□□□□□ -1.53
VAM3YOR106W RPC34P32910 317 aa5.5□□□□□ -1.53
VAM3YOR106W LTP1P40347 161 aa5.5□□□□□ -1.53
VAM3YOR106W YJL043WP47053 257 aa5.5□□□□□ -1.53
VAM3YOR106W YJR120WP47157 116 aa5.5□□□□□ -1.53
VAM3YOR106W PTP1P25044 335 aa5.49□□□□□ -1.53
VAM3YOR106W MRPL9P31334 269 aa5.49□□□□□ -1.53
VAM3YOR106W EAF5P39995 279 aa5.49□□□□□ -1.53
VAM3YOR106W XBP1P40489 647 aa5.49□□□□□ -1.53
VAM3YOR106W MNT2P53059 558 aa5.49□□□□□ -1.53
VAM3YOR106W ECM38Q05902 660 aaPredicted RBP5.49□□□□□ -1.53
VAM3YOR106W IRC3Q06683 689 aa5.49□□□□□ -1.53
VAM3YOR106W HOS1Q12214 470 aa5.49□□□□□ -1.53
VAM3YOR106W HEM12P32347 362 aaPredicted RBP5.48□□□□□ -1.53
VAM3YOR106W OPT1P40897 799 aa5.48□□□□□ -1.53
VAM3YOR106W STL1P39932 569 aa5.47□□□□□ -1.53
VAM3YOR106W YFL015CP43578 164 aa5.47□□□□□ -1.53
VAM3YOR106W BNA3P47039 444 aaKnown RBP5.47□□□□□ -1.53
VAM3YOR106W ATP23P53722 227 aa5.47□□□□□ -1.53
VAM3YOR106W COG6P53959 839 aa5.47□□□□□ -1.53
VAM3YOR106W WAR1Q03631 944 aa5.47□□□□□ -1.53
VAM3YOR106W SEC3P33332 1336 aaKnown RBP5.47□□□□□ -1.53
VAM3YOR106W ARG1P22768 420 aa5.46□□□□□ -1.54
VAM3YOR106W MBR1P23493 339 aa5.46□□□□□ -1.54
VAM3YOR106W YPT10P38146 199 aa5.46□□□□□ -1.54
VAM3YOR106W APD1P38281 316 aa5.46□□□□□ -1.54
VAM3YOR106W NET1P47035 1189 aa5.46□□□□□ -1.54
VAM3YOR106W GLO1P50107 326 aa5.46□□□□□ -1.54
VAM3YOR106W PEX14P53112 341 aa5.46□□□□□ -1.54
VAM3YOR106W AAC1P04710 309 aa5.45□□□□□ -1.54
VAM3YOR106W AQY1P0CD91 305 aa5.45□□□□□ -1.54
VAM3YOR106W YPK1P12688 680 aaKnown RBP5.45□□□□□ -1.54
VAM3YOR106W PET309P32522 965 aaPredicted RBP5.45□□□□□ -1.54
VAM3YOR106W TFC4P33339 1025 aa5.45□□□□□ -1.54
VAM3YOR106W PAF1P38351 445 aa5.45□□□□□ -1.54
VAM3YOR106W SSP120P39931 234 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 80 ms