RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W PTA1Q01329 785 aaPredicted RBP3.42□□□□□ -1.86
DDR48YMR173W UME1Q03010 460 aa3.42□□□□□ -1.86
DDR48YMR173W TRS23Q03784 219 aa3.42□□□□□ -1.86
DDR48YMR173W ORM2Q06144 216 aa3.42□□□□□ -1.86
DDR48YMR173W ARR3Q06598 404 aa3.42□□□□□ -1.86
DDR48YMR173W WHI2P12611 486 aa3.41□□□□□ -1.86
DDR48YMR173W CAP1P28495 268 aaKnown RBP3.41□□□□□ -1.86
DDR48YMR173W FAT1P38225 669 aa3.41□□□□□ -1.86
DDR48YMR173W VID28P40547 921 aa3.41□□□□□ -1.86
DDR48YMR173W GPG1P53130 126 aa3.41□□□□□ -1.86
DDR48YMR173W YNR029CP53729 429 aaKnown RBP3.41□□□□□ -1.86
DDR48YMR173W USA1Q03714 838 aa3.41□□□□□ -1.86
DDR48YMR173W YHM2Q04013 314 aa3.41□□□□□ -1.86
DDR48YMR173W IRC3Q06683 689 aa3.41□□□□□ -1.86
DDR48YMR173W AIM41Q12032 185 aa3.41□□□□□ -1.86
DDR48YMR173W GLN4P13188 809 aaKnown RBP3.4□□□□□ -1.87
DDR48YMR173W LOT5P34234 306 aa3.4□□□□□ -1.87
DDR48YMR173W FPR3P38911 411 aaKnown RBP3.4□□□□□ -1.87
DDR48YMR173W YEL025CP39991 1188 aa3.4□□□□□ -1.87
DDR48YMR173W GPP1P41277 250 aaKnown RBP3.4□□□□□ -1.87
DDR48YMR173W BUD17P53727 317 aa3.4□□□□□ -1.87
DDR48YMR173W TIM50Q02776 476 aa3.4□□□□□ -1.87
DDR48YMR173W MFM1Q02783 413 aa3.4□□□□□ -1.87
DDR48YMR173W YCG1Q06680 1035 aa3.4□□□□□ -1.87
DDR48YMR173W YPL216WQ08964 1102 aa3.4□□□□□ -1.87
DDR48YMR173W TGS1Q12052 315 aa3.4□□□□□ -1.87
DDR48YMR173W FRE7Q12333 620 aa3.4□□□□□ -1.87
DDR48YMR173W RPS21AP0C0V8 87 aaKnown RBP3.39□□□□□ -1.87
DDR48YMR173W HMG2P12684 1045 aa3.39□□□□□ -1.87
DDR48YMR173W RPC34P32910 317 aa3.39□□□□□ -1.87
DDR48YMR173W APD1P38281 316 aa3.39□□□□□ -1.87
DDR48YMR173W HEM1P09950 548 aaPredicted RBP3.38□□□□□ -1.87
DDR48YMR173W GSY2P27472 705 aa3.38□□□□□ -1.87
DDR48YMR173W CCL1P37366 393 aa3.38□□□□□ -1.87
DDR48YMR173W YPT10P38146 199 aa3.38□□□□□ -1.87
DDR48YMR173W BRN1P38170 754 aa3.38□□□□□ -1.87
DDR48YMR173W OPT1P40897 799 aa3.38□□□□□ -1.87
DDR48YMR173W YJR142WP47173 342 aa3.38□□□□□ -1.87
DDR48YMR173W SAP4P53036 818 aa3.38□□□□□ -1.87
DDR48YMR173W PEF1P53238 335 aa3.38□□□□□ -1.87
DDR48YMR173W GFD1Q04839 188 aaKnown RBP3.38□□□□□ -1.87
DDR48YMR173W AQY1P0CD91 305 aa3.37□□□□□ -1.87
DDR48YMR173W VPS33P20795 691 aa3.37□□□□□ -1.87
DDR48YMR173W BEM3P32873 1128 aa3.37□□□□□ -1.87
DDR48YMR173W YJL193WP39542 402 aa3.37□□□□□ -1.87
DDR48YMR173W TDA10P42938 290 aa3.37□□□□□ -1.87
DDR48YMR173W NMD5P46970 1048 aa3.37□□□□□ -1.87
DDR48YMR173W ATP23P53722 227 aa3.37□□□□□ -1.87
DDR48YMR173W GIS2P53849 153 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
DDR48YMR173W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
DDR48YMR173W NUP145P49687 1317 aa3.37□□□□□ -1.87
DDR48YMR173W DGR2P32330 852 aa3.36□□□□□ -1.87
DDR48YMR173W EUG1P32474 517 aa3.36□□□□□ -1.87
DDR48YMR173W EHT1P38295 451 aa3.36□□□□□ -1.87
DDR48YMR173W YHR033WP38690 423 aa3.36□□□□□ -1.87
DDR48YMR173W EXO1P39875 702 aa3.36□□□□□ -1.87
DDR48YMR173W BST1P43571 1029 aa3.36□□□□□ -1.87
DDR48YMR173W DUG1P43616 481 aaKnown RBP3.36□□□□□ -1.87
DDR48YMR173W SPN1Q06505 410 aaPredicted RBP3.36□□□□□ -1.87
DDR48YMR173W BSP1Q06604 576 aa3.36□□□□□ -1.87
DDR48YMR173W YGR161W-CQ3E744 92 aa3.36□□□□□ -1.87
DDR48YMR173W AEP2P22136 580 aa3.35□□□□□ -1.87
DDR48YMR173W TSR4P25040 408 aa3.35□□□□□ -1.87
DDR48YMR173W MRPL9P31334 269 aa3.35□□□□□ -1.87
DDR48YMR173W HXT4P32467 576 aa3.35□□□□□ -1.87
DDR48YMR173W RMA1P36001 430 aaKnown RBP3.35□□□□□ -1.87
DDR48YMR173W SRP68P38687 599 aaKnown RBP3.35□□□□□ -1.87
DDR48YMR173W YFL015CP43578 164 aa3.35□□□□□ -1.87
DDR48YMR173W IRC5P43610 853 aa3.35□□□□□ -1.87
DDR48YMR173W RNR4P49723 345 aaKnown RBP3.35□□□□□ -1.87
DDR48YMR173W YGL081WP53156 320 aa3.35□□□□□ -1.87
DDR48YMR173W NEW1Q08972 1196 aaKnown RBP3.35□□□□□ -1.87
DDR48YMR173W AAC1P04710 309 aa3.34□□□□□ -1.87
DDR48YMR173W RNR3P21672 869 aaKnown RBP3.34□□□□□ -1.87
DDR48YMR173W YGR237CP50089 785 aa3.34□□□□□ -1.87
DDR48YMR173W DOS2P54858 310 aa3.34□□□□□ -1.87
DDR48YMR173W SKY1Q03656 742 aa3.34□□□□□ -1.87
DDR48YMR173W FAP7Q12055 197 aaPredicted RBP3.34□□□□□ -1.87
DDR48YMR173W RDL1Q12305 139 aaKnown RBP3.34□□□□□ -1.87
DDR48YMR173W VPS5Q92331 675 aa3.34□□□□□ -1.87
DDR48YMR173W ATP12P22135 325 aa3.33□□□□□ -1.88
DDR48YMR173W CWH43P25618 953 aa3.33□□□□□ -1.88
DDR48YMR173W YJU2P28320 278 aaPredicted RBP3.33□□□□□ -1.88
DDR48YMR173W PXL1P36166 706 aa3.33□□□□□ -1.88
DDR48YMR173W GPP2P40106 250 aaKnown RBP3.33□□□□□ -1.88
DDR48YMR173W RAD26P40352 1085 aa3.33□□□□□ -1.88
DDR48YMR173W SNO3P43544 222 aa3.33□□□□□ -1.88
DDR48YMR173W YJL043WP47053 257 aa3.33□□□□□ -1.88
DDR48YMR173W SCW4P53334 386 aaKnown RBP3.33□□□□□ -1.88
DDR48YMR173W ERG13P54839 491 aaKnown RBP3.33□□□□□ -1.88
DDR48YMR173W NGL1Q08213 363 aaKnown RBP3.33□□□□□ -1.88
DDR48YMR173W PCL8Q08966 492 aa3.33□□□□□ -1.88
DDR48YMR173W PRS5Q12265 496 aaKnown RBP3.33□□□□□ -1.88
DDR48YMR173W CBP3P21560 335 aa3.32□□□□□ -1.88
DDR48YMR173W PRP45P28004 379 aaPredicted RBP3.32□□□□□ -1.88
DDR48YMR173W DSS4P32601 143 aa3.32□□□□□ -1.88
DDR48YMR173W IDP3P53982 420 aaKnown RBP3.32□□□□□ -1.88
DDR48YMR173W RSC9Q03124 581 aa3.32□□□□□ -1.88
DDR48YMR173W WAR1Q03631 944 aa3.32□□□□□ -1.88
DDR48YMR173W CRT10Q08226 957 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms