RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	SSH4	P32343	579 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	EXO84	P38261	753 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	SUL1	P38359	859 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.37	□□□□□ -1.39	not detected
RSA3	YLR221C	SPC72	P39723	622 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	YEL025C	P39991	1188 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	TMN3	P40071	706 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	FAF1	P40546	346 aa	Predicted RBP	6.37	□□□□□ -1.39
RSA3	YLR221C	MPS3	P47069	682 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	CPR6	P53691	371 aa	Known RBP	6.37	□□□□□ -1.39
RSA3	YLR221C	RIA1	P53893	1110 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	RGC1	Q06108	1083 aa	Known RBP	6.37	□□□□□ -1.39
RSA3	YLR221C	AAD4	Q07747	329 aa		6.37	□□□□□ -1.39
RSA3	YLR221C	MIS1	P09440	975 aa	Known RBP	6.36	□□□□□ -1.39
RSA3	YLR221C	ABF1	P14164	731 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	SIR1	P21691	654 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	MCM3	P24279	971 aa	Known RBP	6.36	□□□□□ -1.39
RSA3	YLR221C	PHO11	P35842	467 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	CTP1	P38152	299 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	PHO12	P38693	467 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	STT3	P39007	718 aa	Known RBP	6.36	□□□□□ -1.39
RSA3	YLR221C	GSM1	P42950	618 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	IML2	P47031	731 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	TEL2	P53038	688 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	FHN1	P53279	174 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	YML131W	Q03102	365 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	YLR040C	Q07988	224 aa		6.36	□□□□□ -1.39
RSA3	YLR221C	SSM4	P40318	1319 aa		6.35	□□□□□ -1.39
RSA3	YLR221C	VPS33	P20795	691 aa		6.35	□□□□□ -1.39
RSA3	YLR221C	EHT1	P38295	451 aa		6.35	□□□□□ -1.39
RSA3	YLR221C	TIM50	Q02776	476 aa		6.35	□□□□□ -1.39
RSA3	YLR221C	CIA1	Q05583	330 aa		6.35	□□□□□ -1.39
RSA3	YLR221C	IWR1	Q07532	353 aa	Predicted RBP	6.35	□□□□□ -1.39
RSA3	YLR221C	POL3	P15436	1097 aa		6.34	□□□□□ -1.39
RSA3	YLR221C	MSS1	P32559	526 aa	Predicted RBP	6.34	□□□□□ -1.39
RSA3	YLR221C	XRS2	P33301	854 aa		6.34	□□□□□ -1.39
RSA3	YLR221C	DHR2	P36009	735 aa	Predicted RBP	6.34	□□□□□ -1.39
RSA3	YLR221C	YJL193W	P39542	402 aa		6.34	□□□□□ -1.39
RSA3	YLR221C	KHA1	P40309	873 aa		6.34	□□□□□ -1.39
RSA3	YLR221C	ERR3	P42222	437 aa		6.34	□□□□□ -1.39
RSA3	YLR221C	PCK1	P10963	549 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	PSY4	P38193	441 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	VFA1	P40080	203 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	LRO1	P40345	661 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	YGR054W	P53235	642 aa	Known RBP	6.33	□□□□□ -1.4
RSA3	YLR221C	GTR1	Q00582	310 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	MRPL13	Q02204	264 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	ARA2	Q04212	335 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	YSH1	Q06224	779 aa	Predicted RBP	6.33	□□□□□ -1.4
RSA3	YLR221C	IZH3	Q07959	543 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	YOL073C	Q08232	322 aa		6.33	□□□□□ -1.4
RSA3	YLR221C	THR1	P17423	357 aa	Known RBP	6.32	□□□□□ -1.4
RSA3	YLR221C	FUB1	P25659	250 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	PRP45	P28004	379 aa	Predicted RBP	6.32	□□□□□ -1.4
RSA3	YLR221C	SSL2	Q00578	843 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	ACS1	Q01574	713 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	TRS130	Q03660	1102 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	VPS64	Q03944	604 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	ENT2	Q05785	613 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	YDL086W	Q07505	273 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	MLH3	Q12083	715 aa		6.32	□□□□□ -1.4
RSA3	YLR221C	CTT1	P06115	562 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	YCL049C	P25577	312 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	FRD1	P32614	470 aa	Known RBP	6.31	□□□□□ -1.4
RSA3	YLR221C	MRPL36	P36531	177 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	PPS1	P38148	807 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	PUG1	P40100	303 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	SMK1	P41808	388 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	POL31	P46957	487 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	SVL3	Q03088	825 aa	Known RBP	6.31	□□□□□ -1.4
RSA3	YLR221C	TRS31	Q03337	283 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	TMA64	Q04600	565 aa	Known RBP	6.31	□□□□□ -1.4
RSA3	YLR221C	ARR3	Q06598	404 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	USV1	Q12132	391 aa		6.31	□□□□□ -1.4
RSA3	YLR221C	NUC1	P08466	329 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	GFA1	P14742	717 aa	Known RBP	6.3	□□□□□ -1.4
RSA3	YLR221C	CLB4	P24871	460 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	DSS4	P32601	143 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	BEM3	P32873	1128 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	VID27	P40157	782 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	RAD26	P40352	1085 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	CAB2	P40506	365 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	YGR151C	P53287	111 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	ATG4	P53867	494 aa		6.3	□□□□□ -1.4
RSA3	YLR221C	MTF2	P10849	440 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	CAP1	P28495	268 aa	Known RBP	6.29	□□□□□ -1.4
RSA3	YLR221C	OAR1	P35731	278 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	MOH1	P38191	138 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	NPR3	P38742	1146 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	YHL017W	P38745	532 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	PSF2	P40359	213 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	IMA1	P53051	589 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	ARC35	P53731	342 aa	Known RBP	6.29	□□□□□ -1.4
RSA3	YLR221C	OPY2	Q06810	360 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	SSP2	Q08646	371 aa		6.29	□□□□□ -1.4
RSA3	YLR221C	VPS34	P22543	875 aa		6.28	□□□□□ -1.4
RSA3	YLR221C	RIT1	P23796	513 aa		6.28	□□□□□ -1.4
RSA3	YLR221C	ELF1	P36053	145 aa		6.28	□□□□□ -1.4
RSA3	YLR221C	APL3	P38065	1025 aa		6.28	□□□□□ -1.4
RSA3	YLR221C	ARG2	P40360	574 aa		6.28	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 138.4 ms