RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C MFB1Q04922 465 aa3.88□□□□□ -1.79
SDO1YLR022C MCM21Q06675 368 aa3.88□□□□□ -1.79
SDO1YLR022C MRH1Q12117 320 aaPredicted RBP3.88□□□□□ -1.79
SDO1YLR022C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SDO1YLR022C SEN1Q00416 2231 aaKnown RBP3.88□□□□□ -1.79
SDO1YLR022C SWI6P09959 803 aa3.87□□□□□ -1.79
SDO1YLR022C MIH1P23748 554 aa3.87□□□□□ -1.79
SDO1YLR022C MSH2P25847 964 aa3.87□□□□□ -1.79
SDO1YLR022C HIR1P32479 840 aa3.87□□□□□ -1.79
SDO1YLR022C HIS7P33734 552 aaKnown RBP3.87□□□□□ -1.79
SDO1YLR022C CUE2P36075 443 aaKnown RBP3.87□□□□□ -1.79
SDO1YLR022C RPN10P38886 268 aaKnown RBP3.87□□□□□ -1.79
SDO1YLR022C CCT3P39077 534 aaKnown RBP3.87□□□□□ -1.79
SDO1YLR022C YFL052WP43551 465 aa3.87□□□□□ -1.79
SDO1YLR022C YNL050CP53952 270 aa3.87□□□□□ -1.79
SDO1YLR022C ARG5,6Q01217 863 aa3.87□□□□□ -1.79
SDO1YLR022C PCL8Q08966 492 aa3.87□□□□□ -1.79
SDO1YLR022C SRD1P09007 221 aa3.86□□□□□ -1.79
SDO1YLR022C KRS1P15180 591 aaKnown RBP3.86□□□□□ -1.79
SDO1YLR022C POL3P15436 1097 aa3.86□□□□□ -1.79
SDO1YLR022C VBA3P25594 458 aa3.86□□□□□ -1.79
SDO1YLR022C YUR1P26725 428 aa3.86□□□□□ -1.79
SDO1YLR022C YHR112CP38716 378 aa3.86□□□□□ -1.79
SDO1YLR022C MET13P53128 600 aa3.86□□□□□ -1.79
SDO1YLR022C NPY1P53164 384 aa3.86□□□□□ -1.79
SDO1YLR022C YAP1802P53309 568 aa3.86□□□□□ -1.79
SDO1YLR022C ORC4P54791 529 aa3.86□□□□□ -1.79
SDO1YLR022C UGO1Q03327 502 aa3.86□□□□□ -1.79
SDO1YLR022C YML037CQ03703 340 aa3.86□□□□□ -1.79
SDO1YLR022C HMO1Q03973 246 aaKnown RBP3.86□□□□□ -1.79
SDO1YLR022C Q0142Q9ZZW4 58 aa3.86□□□□□ -1.79
SDO1YLR022C IRA2P19158 3079 aa3.85□□□□□ -1.79
SDO1YLR022C RPP0P05317 312 aaKnown RBP3.85□□□□□ -1.79
SDO1YLR022C CIT2P08679 460 aa3.85□□□□□ -1.79
SDO1YLR022C IMG2P25642 146 aaPredicted RBP3.85□□□□□ -1.79
SDO1YLR022C HOG1P32485 435 aa3.85□□□□□ -1.79
SDO1YLR022C YKR018CP36114 725 aa3.85□□□□□ -1.79
SDO1YLR022C YKR051WP36142 418 aa3.85□□□□□ -1.79
SDO1YLR022C TRZ1P36159 838 aaPredicted RBP3.85□□□□□ -1.79
SDO1YLR022C LYS9P38999 446 aa3.85□□□□□ -1.79
SDO1YLR022C FUN12P39730 1002 aaKnown RBP3.85□□□□□ -1.79
SDO1YLR022C NOP2P40991 618 aaKnown RBP3.85□□□□□ -1.79
SDO1YLR022C MTL1P53214 551 aa3.85□□□□□ -1.79
SDO1YLR022C SMX3P54999 86 aaPredicted RBP3.85□□□□□ -1.79
SDO1YLR022C SSL2Q00578 843 aa3.85□□□□□ -1.79
SDO1YLR022C CTK1Q03957 528 aaKnown RBP3.85□□□□□ -1.79
SDO1YLR022C NHX1Q04121 633 aa3.85□□□□□ -1.79
SDO1YLR022C BMS1Q08965 1183 aaKnown RBP3.85□□□□□ -1.79
SDO1YLR022C ECM29P38737 1868 aa3.85□□□□□ -1.79
SDO1YLR022C SNF3P10870 884 aa3.84□□□□□ -1.79
SDO1YLR022C POX1P13711 748 aa3.84□□□□□ -1.79
SDO1YLR022C PTK1P36002 662 aaPredicted RBP3.84□□□□□ -1.79
SDO1YLR022C NUP133P36161 1157 aa3.84□□□□□ -1.79
SDO1YLR022C APT2P36973 181 aa3.84□□□□□ -1.79
SDO1YLR022C CST26P38226 397 aa3.84□□□□□ -1.79
SDO1YLR022C HSL7P38274 827 aa3.84□□□□□ -1.79
SDO1YLR022C FMO1P38866 432 aa3.84□□□□□ -1.79
SDO1YLR022C REV7P38927 245 aa3.84□□□□□ -1.79
SDO1YLR022C DSS1P39112 969 aa3.84□□□□□ -1.79
SDO1YLR022C GID8P40208 455 aa3.84□□□□□ -1.79
SDO1YLR022C PCL10P53124 433 aa3.84□□□□□ -1.79
SDO1YLR022C COG8Q04632 607 aa3.84□□□□□ -1.79
SDO1YLR022C RPN7Q06103 429 aaKnown RBP3.84□□□□□ -1.79
SDO1YLR022C YOL057WQ08225 711 aa3.84□□□□□ -1.79
SDO1YLR022C SNU66Q12420 587 aaPredicted RBP3.84□□□□□ -1.79
SDO1YLR022C YKL033W-AQ86ZR7 236 aa3.84□□□□□ -1.79
SDO1YLR022C HRP1Q99383 534 aaKnown RBP3.84□□□□□ -1.79
SDO1YLR022C PYC1P11154 1178 aaKnown RBP3.83□□□□□ -1.8
SDO1YLR022C GFA1P14742 717 aaKnown RBP3.83□□□□□ -1.8
SDO1YLR022C BET2P20133 325 aa3.83□□□□□ -1.8
SDO1YLR022C THI4P32318 326 aa3.83□□□□□ -1.8
SDO1YLR022C UTR4P32626 227 aa3.83□□□□□ -1.8
SDO1YLR022C PEX6P33760 1030 aa3.83□□□□□ -1.8
SDO1YLR022C YEL1P34225 687 aa3.83□□□□□ -1.8
SDO1YLR022C NUP60P39705 539 aa3.83□□□□□ -1.8
SDO1YLR022C TIF4631P39935 952 aaKnown RBP3.83□□□□□ -1.8
SDO1YLR022C OSW7P43611 510 aa3.83□□□□□ -1.8
SDO1YLR022C VPS73P53142 486 aaKnown RBP3.83□□□□□ -1.8
SDO1YLR022C IOC4Q04213 475 aa3.83□□□□□ -1.8
SDO1YLR022C LAM4P38800 1345 aa3.82□□□□□ -1.8
SDO1YLR022C CDC43P18898 376 aa3.82□□□□□ -1.8
SDO1YLR022C KIN3P22209 435 aa3.82□□□□□ -1.8
SDO1YLR022C ERG6P25087 383 aaKnown RBP3.82□□□□□ -1.8
SDO1YLR022C TDP1P38319 544 aa3.82□□□□□ -1.8
SDO1YLR022C CBR1P38626 284 aaKnown RBP3.82□□□□□ -1.8
SDO1YLR022C ARP1P38696 384 aa3.82□□□□□ -1.8
SDO1YLR022C HRB1P38922 454 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SDO1YLR022C MAM1P40065 302 aa3.82□□□□□ -1.8
SDO1YLR022C TAH11P47112 604 aa3.82□□□□□ -1.8
SDO1YLR022C AZR1P50080 613 aa3.82□□□□□ -1.8
SDO1YLR022C PAN2P53010 1115 aaPredicted RBP3.82□□□□□ -1.8
SDO1YLR022C FHN1P53279 174 aa3.82□□□□□ -1.8
SDO1YLR022C ARP4P80428 489 aa3.82□□□□□ -1.8
SDO1YLR022C REC102Q02721 264 aa3.82□□□□□ -1.8
SDO1YLR022C SLD5Q03406 294 aa3.82□□□□□ -1.8
SDO1YLR022C SKY1Q03656 742 aa3.82□□□□□ -1.8
SDO1YLR022C POB3Q04636 552 aaKnown RBP3.82□□□□□ -1.8
SDO1YLR022C HCR1Q05775 265 aaKnown RBP3.82□□□□□ -1.8
SDO1YLR022C TAF3Q12297 353 aa3.82□□□□□ -1.8
SDO1YLR022C GCN1P33892 2672 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms