RNA–Protein interactions for RNA: YKL088W

CAB3, Transcript of Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis, yeast

Gene CAB3, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAB3	YKL088W	PSF3	Q12146	194 aa		5.1	□□□□□ -1.59
CAB3	YKL088W	UBC1	P21734	215 aa	Known RBP	5.09	□□□□□ -1.59
CAB3	YKL088W	ADP1	P25371	1049 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	RPC53	P25441	422 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	CYS3	P31373	394 aa	Known RBP	5.09	□□□□□ -1.59
CAB3	YKL088W	DPH2	P32461	534 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	NPL6	P32832	435 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	TGL1	P34163	548 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	UGA2	P38067	497 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	DUN1	P39009	513 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	STL1	P39932	569 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	YER010C	P40011	234 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	SCS2	P40075	244 aa	Known RBP	5.09	□□□□□ -1.59
CAB3	YKL088W	PSF2	P40359	213 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	AXL1	P40851	1208 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	YFL052W	P43551	465 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	ENP2	P48234	707 aa	Known RBP	5.09	□□□□□ -1.59
CAB3	YKL088W	PUS4	P48567	403 aa	Known RBP	5.09	□□□□□ -1.59
CAB3	YKL088W	UTP21	Q06078	939 aa	Predicted RBP	5.09	□□□□□ -1.59
CAB3	YKL088W	VHS3	Q08438	674 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	PGC1	Q08959	321 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	TRM8	Q12009	286 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	BUG1	Q12191	341 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	YBR182C-A	Q8TGU6	64 aa		5.09	□□□□□ -1.59
CAB3	YKL088W	SES1	P07284	462 aa	Known RBP	5.09	□□□□□ -1.6
CAB3	YKL088W	GPA1	P08539	472 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	ADH4	P10127	382 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	RED1	P14291	827 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	MTH1	P35198	433 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	SAP190	P36123	1033 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	CRG1	P38892	291 aa	RIP-Chip data	5.09	□□□□□ -1.6	not detected
CAB3	YKL088W	UME6	P39001	836 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	ICP55	P40051	511 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	YIR042C	P40586	236 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	LEM3	P42838	414 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	EPL1	P43572	832 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	NUP85	P46673	744 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	IRC8	P47046	822 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	INM2	Q05533	292 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	RSA3	Q05942	220 aa	Known RBP	5.09	□□□□□ -1.6
CAB3	YKL088W	MDM38	Q08179	573 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	NGL1	Q08213	363 aa	Known RBP	5.09	□□□□□ -1.6
CAB3	YKL088W	YLL058W	Q12198	575 aa		5.09	□□□□□ -1.6
CAB3	YKL088W	FUM1	P08417	488 aa	Known RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	GLN4	P13188	809 aa	Known RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	COQ1	P18900	473 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	ORC2	P32833	620 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	BCK2	P33306	851 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
CAB3	YKL088W	SRP68	P38687	599 aa	Known RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	POP2	P39008	433 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	SWD1	P39706	426 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	YER130C	P39959	443 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	SET2	P46995	733 aa	Known RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	YJR098C	P47139	656 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	LYS4	P49367	693 aa	Predicted RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	YGR045C	P53229	120 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	YPR196W	Q06595	470 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	DIB1	Q06819	143 aa	Predicted RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	YPL277C	Q08989	487 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	CFT2	Q12102	859 aa	Predicted RBP	5.08	□□□□□ -1.6
CAB3	YKL088W	Q0142	Q9ZZW4	58 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	HKR1	P41809	1802 aa		5.08	□□□□□ -1.6
CAB3	YKL088W	PHO5	P00635	467 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	CHO2	P05374	869 aa	Known RBP	5.07	□□□□□ -1.6
CAB3	YKL088W	SWI6	P09959	803 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	PDX1	P16451	410 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	ACE2	P21192	770 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	RFA1	P22336	621 aa	Known RBP	5.07	□□□□□ -1.6
CAB3	YKL088W	MCM3	P24279	971 aa	Known RBP	5.07	□□□□□ -1.6
CAB3	YKL088W	CLB4	P24871	460 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	MDL2	P33311	773 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	LTV1	P34078	463 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	YKR018C	P36114	725 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	NPP2	P39997	493 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	LYS14	P40971	790 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	RMD8	P43620	662 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	MTD1	Q02046	320 aa	Known RBP	5.07	□□□□□ -1.6
CAB3	YKL088W	YPL071C	Q02864	156 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	VTI1	Q04338	217 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	YMR074C	Q04773	145 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	MFB1	Q04922	465 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	YPL191C	Q08930	360 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	HSP42	Q12329	375 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	NSI1	Q12457	570 aa		5.07	□□□□□ -1.6
CAB3	YKL088W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
CAB3	YKL088W	HXT4	P32467	576 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	FRD1	P32614	470 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	STE13	P33894	931 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	RFT1	P38206	574 aa	Predicted RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	IFA38	P38286	347 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	YBR225W	P38321	900 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	MSC7	P38694	644 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	RRM3	P38766	723 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	SPL2	P38839	148 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	SET5	P38890	526 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	AKR1	P39010	764 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	RPN3	P40016	523 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	KHA1	P40309	873 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	YPT11	P48559	417 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms