RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM1, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM1	YJL124C	DCS2	Q12123	353 aa		3.59	□□□□□ -1.83
LSM1	YJL124C	HAL9	Q12180	1030 aa		3.59	□□□□□ -1.83
LSM1	YJL124C	ZRT2	Q12436	422 aa		3.59	□□□□□ -1.83
LSM1	YJL124C	PCD1	Q12524	340 aa		3.59	□□□□□ -1.83
LSM1	YJL124C	SEC39	Q12745	709 aa		3.59	□□□□□ -1.83
LSM1	YJL124C	APM4	Q99186	491 aa		3.59	□□□□□ -1.83
LSM1	YJL124C	YLR358C	O13565	187 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	ADE8	P04161	214 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	PUT4	P15380	627 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	NCP1	P16603	691 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	ERS1	P17261	260 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	DBP5	P20449	482 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	SPC110	P32380	944 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	SAC6	P32599	642 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	SUR1	P33300	382 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YKT6	P36015	200 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	OAF3	P36023	863 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	KAE1	P36132	386 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YKR073C	P36153	106 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	APE3	P37302	537 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	YMR124W	P39523	943 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	ALD5	P40047	520 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	PUG1	P40100	303 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	SIP5	P40210	489 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	OSW5	P40219	148 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	PSF2	P40359	213 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YJL070C	P40361	888 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	NAS2	P40555	220 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YJR039W	P47107	1121 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	BPL1	P48445	690 aa	Predicted RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	UTP22	P53254	1237 aa	Predicted RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	DAM1	P53267	343 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YGR283C	P53336	341 aa	Predicted RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	NCE103	P53615	221 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	SNF12	P53628	566 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	ARP5	P53946	755 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	REX2	P54964	269 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	TOF2	Q02208	771 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	NHX1	Q04121	633 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	AIM32	Q04689	311 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	TFC6	Q06339	672 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	OMS1	Q06668	471 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	NOP6	Q07623	225 aa	Known RBP	3.58	□□□□□ -1.84
LSM1	YJL124C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
LSM1	YJL124C	TGL5	Q12043	749 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YLL054C	Q12244	843 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	ADF1	Q2V2Q1	113 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	YOR019W	Q99248	730 aa		3.58	□□□□□ -1.84
LSM1	YJL124C	TPK1	P06244	397 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	DED1	P06634	604 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	DBP3	P20447	523 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	DBP2	P24783	546 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	PHO84	P25297	587 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	NPP1	P25353	742 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	ADP1	P25371	1049 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	KIP1	P28742	1111 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	CCR4	P31384	837 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	DPH5	P32469	300 aa	Predicted RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	WHI3	P34761	661 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	YUH1	P35127	236 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	GCS1	P35197	352 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	MRPL36	P36531	177 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	YRO2	P38079	344 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	ARL1	P38116	183 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	PCH2	P38126	564 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	IFA38	P38286	347 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	RIM11	P38615	370 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	RPN10	P38886	268 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	YHR202W	P38887	602 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	PIK1	P39104	1066 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	SWD1	P39706	426 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	AIM10	P39965	576 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	SPO22	P40511	975 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	THI6	P41835	540 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	YFL052W	P43551	465 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	STU2	P46675	888 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	PUS4	P48567	403 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	SHE4	P51534	789 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	HFM1	P51979	1187 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	TEL2	P53038	688 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	RRT6	P53117	311 aa	Predicted RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	BSC5	P53755	489 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	VPS75	P53853	264 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	DAK1	P54838	584 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	PRO2	P54885	456 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	YAP6	Q03935	383 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	VBA4	Q04602	768 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	ERB1	Q04660	807 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	SNO4	Q04902	237 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	SPH1	Q06160	661 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	EST2	Q06163	884 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	MET7	Q08645	548 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	HSP33	Q08914	237 aa	Known RBP	3.57	□□□□□ -1.84
LSM1	YJL124C	HSP32	Q08992	237 aa		3.57	□□□□□ -1.84
LSM1	YJL124C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
LSM1	YJL124C	SEC53	P07283	254 aa	Known RBP	3.56	□□□□□ -1.84
LSM1	YJL124C	VAS1	P07806	1104 aa	Known RBP	3.56	□□□□□ -1.84
LSM1	YJL124C	ATP12	P22135	325 aa		3.56	□□□□□ -1.84
LSM1	YJL124C	PRE8	P23639	250 aa		3.56	□□□□□ -1.84
LSM1	YJL124C	PRP22	P24384	1145 aa	Known RBP	3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms