RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YEL076CP39971 216 aa3.91□□□□□ -1.78
VMA21YGR105W NIT2P47016 307 aa3.91□□□□□ -1.78
VMA21YGR105W CPA2P03965 1118 aaKnown RBP3.9□□□□□ -1.79
VMA21YGR105W HOP1P20050 605 aa3.9□□□□□ -1.79
VMA21YGR105W NUP1P20676 1076 aa3.9□□□□□ -1.79
VMA21YGR105W AEP2P22136 580 aa3.9□□□□□ -1.79
VMA21YGR105W PEA2P40091 420 aa3.9□□□□□ -1.79
VMA21YGR105W IRC5P43610 853 aa3.9□□□□□ -1.79
VMA21YGR105W YJR120WP47157 116 aa3.9□□□□□ -1.79
VMA21YGR105W SPC105P53148 917 aa3.9□□□□□ -1.79
VMA21YGR105W YNL018CP53976 612 aa3.9□□□□□ -1.79
VMA21YGR105W RIM13Q03792 727 aa3.9□□□□□ -1.79
VMA21YGR105W HOF1Q05080 669 aa3.9□□□□□ -1.79
VMA21YGR105W YDL073WQ07454 984 aa3.9□□□□□ -1.79
VMA21YGR105W TRE2Q08693 809 aa3.9□□□□□ -1.79
VMA21YGR105W TMA17Q12513 150 aa3.9□□□□□ -1.79
VMA21YGR105W AI5_ALPHAQ9ZZX1 630 aa3.9□□□□□ -1.79
VMA21YGR105W PMA2P19657 947 aa3.89□□□□□ -1.79
VMA21YGR105W CAP1P28495 268 aaKnown RBP3.89□□□□□ -1.79
VMA21YGR105W SRP68P38687 599 aaKnown RBP3.89□□□□□ -1.79
VMA21YGR105W YJL193WP39542 402 aa3.89□□□□□ -1.79
VMA21YGR105W EAF5P39995 279 aa3.89□□□□□ -1.79
VMA21YGR105W PIP2P52960 996 aa3.89□□□□□ -1.79
VMA21YGR105W PEF1P53238 335 aa3.89□□□□□ -1.79
VMA21YGR105W COQ6P53318 479 aa3.89□□□□□ -1.79
VMA21YGR105W RPS15Q01855 142 aaKnown RBP3.89□□□□□ -1.79
VMA21YGR105W YOR378WQ08902 515 aa3.89□□□□□ -1.79
VMA21YGR105W CWC2Q12046 339 aaPredicted RBP3.89□□□□□ -1.79
VMA21YGR105W RPL7AP05737 244 aaKnown RBP3.88□□□□□ -1.79
VMA21YGR105W PCK1P10963 549 aa3.88□□□□□ -1.79
VMA21YGR105W COX11P19516 300 aaKnown RBP3.88□□□□□ -1.79
VMA21YGR105W VPS33P20795 691 aa3.88□□□□□ -1.79
VMA21YGR105W TSR4P25040 408 aa3.88□□□□□ -1.79
VMA21YGR105W HOT13P36078 116 aa3.88□□□□□ -1.79
VMA21YGR105W YBR071WP38243 211 aa3.88□□□□□ -1.79
VMA21YGR105W SEG1Q04279 960 aa3.88□□□□□ -1.79
VMA21YGR105W ECM38Q05902 660 aaPredicted RBP3.88□□□□□ -1.79
VMA21YGR105W RPL7BQ12213 244 aaKnown RBP3.88□□□□□ -1.79
VMA21YGR105W PGK1P00560 416 aaKnown RBP3.87□□□□□ -1.79
VMA21YGR105W TUF1P02992 437 aaKnown RBP3.87□□□□□ -1.79
VMA21YGR105W WHI2P12611 486 aa3.87□□□□□ -1.79
VMA21YGR105W CCL1P37366 393 aa3.87□□□□□ -1.79
VMA21YGR105W YPT10P38146 199 aa3.87□□□□□ -1.79
VMA21YGR105W SAP4P53036 818 aa3.87□□□□□ -1.79
VMA21YGR105W MDR1P53258 950 aa3.87□□□□□ -1.79
VMA21YGR105W AFT2Q08957 416 aa3.87□□□□□ -1.79
VMA21YGR105W TGS1Q12052 315 aa3.87□□□□□ -1.79
VMA21YGR105W RNR3P21672 869 aaKnown RBP3.86□□□□□ -1.79
VMA21YGR105W APN1P22936 367 aa3.86□□□□□ -1.79
VMA21YGR105W HEM12P32347 362 aaPredicted RBP3.86□□□□□ -1.79
VMA21YGR105W LOT5P34234 306 aa3.86□□□□□ -1.79
VMA21YGR105W SLD3P53135 668 aa3.86□□□□□ -1.79
VMA21YGR105W COG6P53959 839 aa3.86□□□□□ -1.79
VMA21YGR105W MTD1Q02046 320 aaKnown RBP3.86□□□□□ -1.79
VMA21YGR105W USA1Q03714 838 aa3.86□□□□□ -1.79
VMA21YGR105W VPS5Q92331 675 aa3.86□□□□□ -1.79
VMA21YGR105W AIM44Q99299 758 aa3.86□□□□□ -1.79
VMA21YGR105W SEC3P33332 1336 aaKnown RBP3.86□□□□□ -1.79
VMA21YGR105W HEM1P09950 548 aaPredicted RBP3.85□□□□□ -1.79
VMA21YGR105W AQY1P0CD91 305 aa3.85□□□□□ -1.79
VMA21YGR105W CWH43P25618 953 aa3.85□□□□□ -1.79
VMA21YGR105W DSS4P32601 143 aa3.85□□□□□ -1.79
VMA21YGR105W ENP1P38333 483 aaKnown RBP3.85□□□□□ -1.79
VMA21YGR105W XBP1P40489 647 aa3.85□□□□□ -1.79
VMA21YGR105W YFL015CP43578 164 aa3.85□□□□□ -1.79
VMA21YGR105W MNT2P53059 558 aa3.85□□□□□ -1.79
VMA21YGR105W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
VMA21YGR105W SEC12P11655 471 aa3.84□□□□□ -1.79
VMA21YGR105W ARG1P22768 420 aa3.84□□□□□ -1.79
VMA21YGR105W MBR1P23493 339 aa3.84□□□□□ -1.79
VMA21YGR105W TFC4P33339 1025 aa3.84□□□□□ -1.79
VMA21YGR105W YJL043WP47053 257 aa3.84□□□□□ -1.79
VMA21YGR105W RTK1Q12100 620 aaPredicted RBP3.84□□□□□ -1.79
VMA21YGR105W URA3P03962 267 aa3.83□□□□□ -1.8
VMA21YGR105W YPK1P12688 680 aaKnown RBP3.83□□□□□ -1.8
VMA21YGR105W BET2P20133 325 aa3.83□□□□□ -1.8
VMA21YGR105W MRPL9P31334 269 aa3.83□□□□□ -1.8
VMA21YGR105W RPC34P32910 317 aa3.83□□□□□ -1.8
VMA21YGR105W EXO1P39875 702 aa3.83□□□□□ -1.8
VMA21YGR105W SNM1P40993 198 aa3.83□□□□□ -1.8
VMA21YGR105W BNA3P47039 444 aaKnown RBP3.83□□□□□ -1.8
VMA21YGR105W WAR1Q03631 944 aa3.83□□□□□ -1.8
VMA21YGR105W GFD1Q04839 188 aaKnown RBP3.83□□□□□ -1.8
VMA21YGR105W PEX15Q08215 383 aa3.83□□□□□ -1.8
VMA21YGR105W PCL8Q08966 492 aa3.83□□□□□ -1.8
VMA21YGR105W FRE7Q12333 620 aa3.83□□□□□ -1.8
VMA21YGR105W KAR1P11927 433 aa3.82□□□□□ -1.8
VMA21YGR105W PTP1P25044 335 aa3.82□□□□□ -1.8
VMA21YGR105W PLC1P32383 869 aa3.82□□□□□ -1.8
VMA21YGR105W STL1P39932 569 aa3.82□□□□□ -1.8
VMA21YGR105W EMP65P40085 556 aa3.82□□□□□ -1.8
VMA21YGR105W MAD2P40958 196 aa3.82□□□□□ -1.8
VMA21YGR105W ATG36P46983 293 aa3.82□□□□□ -1.8
VMA21YGR105W HOL1P53389 586 aa3.82□□□□□ -1.8
VMA21YGR105W DIN7Q12086 430 aa3.82□□□□□ -1.8
VMA21YGR105W YMR084WA2P2R3 262 aa3.81□□□□□ -1.8
VMA21YGR105W STB5P38699 743 aa3.81□□□□□ -1.8
VMA21YGR105W NET1P47035 1189 aa3.81□□□□□ -1.8
VMA21YGR105W PEX14P53112 341 aa3.81□□□□□ -1.8
VMA21YGR105W ATP23P53722 227 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms