RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W GFD2P25370 566 aaKnown RBP11.73□□□□□ -0.53
RTF1YGL244W SPR1P32603 445 aa11.73□□□□□ -0.53
RTF1YGL244W NPL6P32832 435 aa11.73□□□□□ -0.53
RTF1YGL244W SHP1P34223 423 aa11.73□□□□□ -0.53
RTF1YGL244W YKR015CP36111 568 aa11.73□□□□□ -0.53
RTF1YGL244W SLM4P38247 162 aa11.73□□□□□ -0.53
RTF1YGL244W AMN1P38285 549 aaPredicted RBP11.73□□□□□ -0.53
RTF1YGL244W MPH1P40562 993 aa11.73□□□□□ -0.53
RTF1YGL244W LAM5P43560 674 aa11.73□□□□□ -0.53
RTF1YGL244W CUL3P53202 744 aa11.73□□□□□ -0.53
RTF1YGL244W CDC55Q00362 526 aa11.73□□□□□ -0.53
RTF1YGL244W TRS130Q03660 1102 aa11.73□□□□□ -0.53
RTF1YGL244W HRT3Q12347 344 aa11.73□□□□□ -0.53
RTF1YGL244W RIF1P29539 1916 aa11.73□□□□□ -0.53
RTF1YGL244W CTP1P38152 299 aa11.72□□□□□ -0.53
RTF1YGL244W HMF1P40037 129 aaKnown RBP11.72□□□□□ -0.53
RTF1YGL244W POL31P46957 487 aa11.72□□□□□ -0.53
RTF1YGL244W YGL108CP53139 140 aa11.72□□□□□ -0.53
RTF1YGL244W MET7Q08645 548 aa11.72□□□□□ -0.53
RTF1YGL244W VIK1Q12045 647 aa11.72□□□□□ -0.53
RTF1YGL244W ADF1Q2V2Q1 113 aa11.72□□□□□ -0.53
RTF1YGL244W TFC1P32367 649 aa11.71□□□□□ -0.53
RTF1YGL244W KAR9P32526 644 aa11.71□□□□□ -0.53
RTF1YGL244W BCK2P33306 851 aa11.71□□□□□ -0.53
RTF1YGL244W CAB2P40506 365 aa11.71□□□□□ -0.53
RTF1YGL244W EAF6P47128 113 aa11.71□□□□□ -0.53
RTF1YGL244W DCP2P53550 970 aaKnown RBP11.71□□□□□ -0.53
RTF1YGL244W TMA20P89886 181 aaPredicted RBP11.71□□□□□ -0.53
RTF1YGL244W MSH5Q12175 901 aa11.71□□□□□ -0.53
RTF1YGL244W IES3Q12345 250 aa11.71□□□□□ -0.53
RTF1YGL244W ATG11Q12527 1178 aa11.71□□□□□ -0.53
RTF1YGL244W ATR1P13090 542 aa11.71□□□□□ -0.54
RTF1YGL244W MRP4P32902 394 aa11.71□□□□□ -0.54
RTF1YGL244W TVP38P36164 337 aa11.71□□□□□ -0.54
RTF1YGL244W PDX3P38075 228 aaKnown RBP11.71□□□□□ -0.54
RTF1YGL244W YIL054WP40524 105 aa11.71□□□□□ -0.54
RTF1YGL244W ZAP1P47043 880 aa11.71□□□□□ -0.54
RTF1YGL244W NOP9P47077 666 aaKnown RBP11.71□□□□□ -0.54
RTF1YGL244W YRR1Q12172 810 aa11.71□□□□□ -0.54
RTF1YGL244W CBP1P07252 654 aa11.7□□□□□ -0.54
RTF1YGL244W TUB1P09733 447 aaKnown RBP11.7□□□□□ -0.54
RTF1YGL244W PUT4P15380 627 aa11.7□□□□□ -0.54
RTF1YGL244W RGR1P19263 1082 aa11.7□□□□□ -0.54
RTF1YGL244W SAN1P22470 610 aa11.7□□□□□ -0.54
RTF1YGL244W DPB2P24482 689 aaPredicted RBP11.7□□□□□ -0.54
RTF1YGL244W CYM1P32898 989 aa11.7□□□□□ -0.54
RTF1YGL244W SKG6P32900 734 aaPredicted RBP11.7□□□□□ -0.54
RTF1YGL244W MRP8P35719 219 aa11.7□□□□□ -0.54
RTF1YGL244W KES1P35844 434 aaKnown RBP11.7□□□□□ -0.54
RTF1YGL244W PHO89P38361 574 aa11.7□□□□□ -0.54
RTF1YGL244W SAH1P39954 449 aaKnown RBP11.7□□□□□ -0.54
RTF1YGL244W EAF5P39995 279 aa11.7□□□□□ -0.54
RTF1YGL244W TEL2P53038 688 aa11.7□□□□□ -0.54
RTF1YGL244W YMR209CQ03648 457 aa11.7□□□□□ -0.54
RTF1YGL244W YDR179W-AQ03983 463 aa11.7□□□□□ -0.54
RTF1YGL244W YET2Q04210 160 aa11.7□□□□□ -0.54
RTF1YGL244W AIM39Q08223 395 aa11.7□□□□□ -0.54
RTF1YGL244W AAD15Q08361 143 aa11.7□□□□□ -0.54
RTF1YGL244W YLL056CQ12177 298 aa11.7□□□□□ -0.54
RTF1YGL244W KCS1Q12494 1050 aa11.7□□□□□ -0.54
RTF1YGL244W ATP2P00830 511 aaKnown RBP11.69□□□□□ -0.54
RTF1YGL244W PAB1P04147 577 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
RTF1YGL244W ADY2P25613 283 aa11.69□□□□□ -0.54
RTF1YGL244W YCR015CP25616 317 aa11.69□□□□□ -0.54
RTF1YGL244W GLN1P32288 370 aaKnown RBP11.69□□□□□ -0.54
RTF1YGL244W YGL036WP53185 909 aaPredicted RBP11.69□□□□□ -0.54
RTF1YGL244W HST2P53686 357 aa11.69□□□□□ -0.54
RTF1YGL244W NMA111P53920 997 aa11.69□□□□□ -0.54
RTF1YGL244W YNL108CP53929 270 aa11.69□□□□□ -0.54
RTF1YGL244W ORM2Q06144 216 aa11.69□□□□□ -0.54
RTF1YGL244W ATG26Q06321 1198 aa11.69□□□□□ -0.54
RTF1YGL244W UBX5Q06682 500 aa11.69□□□□□ -0.54
RTF1YGL244W ASA1Q06822 443 aa11.69□□□□□ -0.54
RTF1YGL244W TMA46Q12000 345 aaKnown RBP11.69□□□□□ -0.54
RTF1YGL244W EMP46Q12396 444 aa11.69□□□□□ -0.54
RTF1YGL244W PRT1P06103 763 aaKnown RBP11.68□□□□□ -0.54
RTF1YGL244W AMS1P22855 1083 aa11.68□□□□□ -0.54
RTF1YGL244W APN2P38207 520 aa11.68□□□□□ -0.54
RTF1YGL244W ERP2P39704 215 aa11.68□□□□□ -0.54
RTF1YGL244W YTP1P53584 459 aa11.68□□□□□ -0.54
RTF1YGL244W ASI2P53895 289 aa11.68□□□□□ -0.54
RTF1YGL244W SFB2P53953 876 aa11.68□□□□□ -0.54
RTF1YGL244W PRO2P54885 456 aaKnown RBP11.68□□□□□ -0.54
RTF1YGL244W RNY1Q02933 434 aaKnown RBP11.68□□□□□ -0.54
RTF1YGL244W PEX15Q08215 383 aa11.68□□□□□ -0.54
RTF1YGL244W MCH5Q08777 521 aa11.68□□□□□ -0.54
RTF1YGL244W PCD1Q12524 340 aa11.68□□□□□ -0.54
RTF1YGL244W GAL10P04397 699 aa11.68□□□□□ -0.54
RTF1YGL244W URA10P30402 227 aa11.68□□□□□ -0.54
RTF1YGL244W BUD2P33314 1104 aa11.68□□□□□ -0.54
RTF1YGL244W GIP1P38229 639 aa11.68□□□□□ -0.54
RTF1YGL244W SHS1Q07657 551 aa11.68□□□□□ -0.54
RTF1YGL244W IOC2Q12072 812 aa11.68□□□□□ -0.54
RTF1YGL244W RGS2Q99188 309 aa11.68□□□□□ -0.54
RTF1YGL244W HPR1P17629 752 aaKnown RBP11.67□□□□□ -0.54
RTF1YGL244W YBL036CP38197 257 aa11.67□□□□□ -0.54
RTF1YGL244W VID24P38263 362 aa11.67□□□□□ -0.54
RTF1YGL244W GGA2P38817 585 aaKnown RBP11.67□□□□□ -0.54
RTF1YGL244W NPT1P39683 429 aaKnown RBP11.67□□□□□ -0.54
RTF1YGL244W YEL025CP39991 1188 aa11.67□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms