RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C FHL1P39521 936 aa8.1□□□□□ -1.11
PUP3YER094C MNN11P46985 422 aaKnown RBP8.1□□□□□ -1.11
PUP3YER094C YJL045WP47052 634 aa8.1□□□□□ -1.11
PUP3YER094C RNT1Q02555 471 aa8.1□□□□□ -1.11
PUP3YER094C HER2Q03557 464 aa8.1□□□□□ -1.11
PUP3YER094C SPO71Q03868 1245 aa8.1□□□□□ -1.11
PUP3YER094C PNP1Q05788 311 aa8.1□□□□□ -1.11
PUP3YER094C STE23Q06010 1027 aa8.1□□□□□ -1.11
PUP3YER094C YLR257WQ06146 321 aaKnown RBP8.1□□□□□ -1.11
PUP3YER094C SEY1Q99287 776 aa8.1□□□□□ -1.11
PUP3YER094C QCR6P00127 147 aa8.09□□□□□ -1.11
PUP3YER094C CCP1P00431 361 aa8.09□□□□□ -1.11
PUP3YER094C YML002WP0CF17 737 aa8.09□□□□□ -1.11
PUP3YER094C CDC24P11433 854 aaPredicted RBP8.09□□□□□ -1.11
PUP3YER094C PEP5P12868 1029 aa8.09□□□□□ -1.11
PUP3YER094C MET16P18408 261 aaPredicted RBP8.09□□□□□ -1.11
PUP3YER094C PDE1P22434 369 aa8.09□□□□□ -1.11
PUP3YER094C YCR015CP25616 317 aa8.09□□□□□ -1.11
PUP3YER094C YIH1P25637 258 aa8.09□□□□□ -1.11
PUP3YER094C PEP7P32609 515 aa8.09□□□□□ -1.11
PUP3YER094C MUD2P36084 527 aaKnown RBP8.09□□□□□ -1.11
PUP3YER094C DUG2P38149 878 aa8.09□□□□□ -1.11
PUP3YER094C DIA4P38705 446 aaPredicted RBP8.09□□□□□ -1.11
PUP3YER094C CKB2P38930 258 aa8.09□□□□□ -1.11
PUP3YER094C CCT2P39076 527 aaKnown RBP8.09□□□□□ -1.11
PUP3YER094C PRM9P39551 298 aa8.09□□□□□ -1.11
PUP3YER094C BFA1P47113 574 aa8.09□□□□□ -1.11
PUP3YER094C RSM26P47141 266 aa8.09□□□□□ -1.11
PUP3YER094C CEG1Q01159 459 aaPredicted RBP8.09□□□□□ -1.11
PUP3YER094C GCN5Q03330 439 aa8.09□□□□□ -1.11
PUP3YER094C AIM32Q04689 311 aa8.09□□□□□ -1.11
PUP3YER094C ECM22Q05958 814 aaPredicted RBP8.09□□□□□ -1.11
PUP3YER094C CDC73Q06697 393 aa8.09□□□□□ -1.11
PUP3YER094C RRD2Q12461 358 aa8.09□□□□□ -1.11
PUP3YER094C ARG4P04076 463 aaPredicted RBP8.08□□□□□ -1.12
PUP3YER094C CMD1P06787 147 aaKnown RBP8.08□□□□□ -1.12
PUP3YER094C ADH4P10127 382 aa8.08□□□□□ -1.12
PUP3YER094C POL3P15436 1097 aa8.08□□□□□ -1.12
PUP3YER094C IDI1P15496 288 aa8.08□□□□□ -1.12
PUP3YER094C URK1P27515 501 aa8.08□□□□□ -1.12
PUP3YER094C HSP78P33416 811 aa8.08□□□□□ -1.12
PUP3YER094C YKR051WP36142 418 aa8.08□□□□□ -1.12
PUP3YER094C AIM18P38884 321 aa8.08□□□□□ -1.12
PUP3YER094C RRT5P43607 289 aa8.08□□□□□ -1.12
PUP3YER094C CNN1P43618 361 aa8.08□□□□□ -1.12
PUP3YER094C TCB2P48231 1178 aa8.08□□□□□ -1.12
PUP3YER094C RFX1P48743 811 aa8.08□□□□□ -1.12
PUP3YER094C COP1P53622 1201 aaKnown RBP8.08□□□□□ -1.12
PUP3YER094C COG6P53959 839 aa8.08□□□□□ -1.12
PUP3YER094C SHR3Q02774 210 aa8.08□□□□□ -1.12
PUP3YER094C PMT7Q06644 662 aa8.08□□□□□ -1.12
PUP3YER094C OMS1Q06668 471 aa8.08□□□□□ -1.12
PUP3YER094C EFG1Q3E705 233 aaKnown RBP8.08□□□□□ -1.12
PUP3YER094C HIS1P00498 297 aaKnown RBP8.07□□□□□ -1.12
PUP3YER094C CBF1P17106 351 aa8.07□□□□□ -1.12
PUP3YER094C PEX1P24004 1043 aa8.07□□□□□ -1.12
PUP3YER094C YME1P32795 747 aa8.07□□□□□ -1.12
PUP3YER094C RAD5P32849 1169 aaPredicted RBP8.07□□□□□ -1.12
PUP3YER094C TSA1P34760 196 aaKnown RBP8.07□□□□□ -1.12
PUP3YER094C YBR225WP38321 900 aa8.07□□□□□ -1.12
PUP3YER094C BIT2P38346 545 aa8.07□□□□□ -1.12
PUP3YER094C FSH1P38777 243 aaKnown RBP8.07□□□□□ -1.12
PUP3YER094C LAM1P38851 1228 aa8.07□□□□□ -1.12
PUP3YER094C SCC4P40090 624 aa8.07□□□□□ -1.12
PUP3YER094C MAF1P41910 395 aa8.07□□□□□ -1.12
PUP3YER094C PCL10P53124 433 aa8.07□□□□□ -1.12
PUP3YER094C YGR127WP53275 312 aa8.07□□□□□ -1.12
PUP3YER094C YNL144CP53907 740 aa8.07□□□□□ -1.12
PUP3YER094C VPS9P54787 451 aa8.07□□□□□ -1.12
PUP3YER094C EAR1Q03212 550 aa8.07□□□□□ -1.12
PUP3YER094C FRA1Q07825 749 aa8.07□□□□□ -1.12
PUP3YER094C SVS1Q12254 260 aa8.07□□□□□ -1.12
PUP3YER094C SPE1P08432 466 aa8.06□□□□□ -1.12
PUP3YER094C TPS2P31688 896 aaKnown RBP8.06□□□□□ -1.12
PUP3YER094C OTU2P38747 307 aaKnown RBP8.06□□□□□ -1.12
PUP3YER094C STL1P39932 569 aa8.06□□□□□ -1.12
PUP3YER094C SMX2P40204 77 aaKnown RBP8.06□□□□□ -1.12
PUP3YER094C BTT1P40314 149 aaPredicted RBP8.06□□□□□ -1.12
PUP3YER094C MND2P40577 368 aa8.06□□□□□ -1.12
PUP3YER094C YJL132WP47014 750 aa8.06□□□□□ -1.12
PUP3YER094C YJR079WP47126 109 aa8.06□□□□□ -1.12
PUP3YER094C UTP8P53276 713 aaKnown RBP8.06□□□□□ -1.12
PUP3YER094C NMA111P53920 997 aa8.06□□□□□ -1.12
PUP3YER094C ARA2Q04212 335 aa8.06□□□□□ -1.12
PUP3YER094C YMR027WQ04371 470 aa8.06□□□□□ -1.12
PUP3YER094C AAD15Q08361 143 aa8.06□□□□□ -1.12
PUP3YER094C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
PUP3YER094C RPB2P08518 1224 aaKnown RBP8.05□□□□□ -1.12
PUP3YER094C RAD16P31244 790 aa8.05□□□□□ -1.12
PUP3YER094C ECM13P38195 257 aa8.05□□□□□ -1.12
PUP3YER094C URA8P38627 578 aaPredicted RBP8.05□□□□□ -1.12
PUP3YER094C RPS10BP46784 105 aaKnown RBP8.05□□□□□ -1.12
PUP3YER094C URB2P47108 1174 aa8.05□□□□□ -1.12
PUP3YER094C RTA1P53047 317 aa8.05□□□□□ -1.12
PUP3YER094C ZIP2P53061 704 aa8.05□□□□□ -1.12
PUP3YER094C DOS2P54858 310 aa8.05□□□□□ -1.12
PUP3YER094C MSH6Q03834 1242 aa8.05□□□□□ -1.12
PUP3YER094C SFH1Q06168 426 aa8.05□□□□□ -1.12
PUP3YER094C RPS10AQ08745 105 aaPredicted RBP8.05□□□□□ -1.12
PUP3YER094C GPM3Q12326 303 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms