RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	YPL277C	Q08989	487 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	LAP2	Q10740	671 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	WRS1	Q12109	432 aa	Known RBP	4.77	□□□□□ -1.65
TFB3	YDR460W	YDR215C	Q12240	137 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	RUP1	Q12242	671 aa		4.77	□□□□□ -1.65
TFB3	YDR460W	LAM4	P38800	1345 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	TRP2	P00899	507 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	CMD1	P06787	147 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	GPA1	P08539	472 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	OSM1	P21375	501 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	YCK2	P23292	546 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	RPC53	P25441	422 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	BMH1	P29311	267 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	LYP1	P32487	611 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	SSE1	P32589	693 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	MRE11	P32829	692 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	OCT1	P35999	772 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	GPT2	P36148	743 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	CCL1	P37366	393 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	MRX3	P38172	270 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	HSE1	P38753	452 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	YER130C	P39959	443 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	AXL1	P40851	1208 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	LYS14	P40971	790 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	GCD14	P46959	383 aa	Predicted RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	IML2	P47031	731 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	UBA2	P52488	636 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	RSM24	Q03976	319 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	SXM1	Q04175	944 aa	Known RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	SFH1	Q06168	426 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	YLR177W	Q06251	628 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	OPI10	Q08202	246 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	SMC5	Q08204	1093 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	YOR289W	Q12012	251 aa	Predicted RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	SSF2	Q12153	453 aa	Predicted RBP	4.76	□□□□□ -1.65
TFB3	YDR460W	YPR053C	Q6Q5F3	151 aa		4.76	□□□□□ -1.65
TFB3	YDR460W	TEF1	P02994	458 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	RPS9B	P05755	195 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	HIS3	P06633	220 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	SIR3	P06701	978 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	RED1	P14291	827 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	PRI2	P20457	528 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	KRR1	P25586	316 aa	Predicted RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	SYP1	P25623	870 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	PMT1	P33775	817 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	KES1	P35844	434 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	RCN1	P36054	211 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	ATP3	P38077	311 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	PFF1	P38244	976 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	YBR225W	P38321	900 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	OCA5	P38738	679 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	NMD3	P38861	518 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	CCT6	P39079	546 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	ICP55	P40051	511 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	PDS1	P40316	373 aa	Predicted RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	JEM1	P40358	645 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	YIL089W	P40500	205 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	RLP7	P40693	322 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	MKT1	P40850	830 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	PAC11	P40960	533 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	YFH7	P43591	353 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	GLG2	P47011	380 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	MCM6	P53091	1017 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	PCL10	P53124	433 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	TYW3	P53177	273 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	RRP46	P53256	223 aa	Predicted RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	TPO2	P53283	614 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	ZPR1	P53303	486 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	ARC35	P53731	342 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	ESBP6	P53918	673 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	BOP3	P53958	396 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	RPL6A	Q02326	176 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	SNZ1	Q03148	297 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	URC2	Q04411	772 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	MCP2	Q06567	569 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	SGO1	Q08490	590 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	FAL1	Q12099	399 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	RTC5	Q12108	567 aa	Known RBP	4.75	□□□□□ -1.65
TFB3	YDR460W	YLR125W	Q12138	136 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	EMP46	Q12396	444 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	RMP1	Q12530	201 aa		4.75	□□□□□ -1.65
TFB3	YDR460W	IPP1	P00817	287 aa	Known RBP	4.74	□□□□□ -1.65
TFB3	YDR460W	MER1	P16523	270 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	DBP5	P20449	482 aa	Known RBP	4.74	□□□□□ -1.65
TFB3	YDR460W	BAS1	P22035	811 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	CNA1	P23287	553 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	YCR051W	P25631	222 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	CDC15	P27636	974 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	GCD7	P32502	381 aa	Predicted RBP	4.74	□□□□□ -1.65
TFB3	YDR460W	SLA2	P33338	968 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	NNK1	P36003	928 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	VPS51	P36116	164 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	ADE17	P38009	592 aa	Known RBP	4.74	□□□□□ -1.65
TFB3	YDR460W	PCH2	P38126	564 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	ALG3	P38179	458 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	SEC31	P38968	1273 aa	Known RBP	4.74	□□□□□ -1.65
TFB3	YDR460W	ALG5	P40350	334 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	VTC2	P43585	828 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	YJL055W	P47044	245 aa		4.74	□□□□□ -1.65
TFB3	YDR460W	HAM1	P47119	197 aa	Known RBP	4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms