RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W VID28P40547 921 aa4.77□□□□□ -1.65
HSP42YDR171W DUG1P43616 481 aaKnown RBP4.77□□□□□ -1.65
HSP42YDR171W BIT61P47041 543 aa4.77□□□□□ -1.65
HSP42YDR171W RIA1P53893 1110 aa4.77□□□□□ -1.65
HSP42YDR171W COG6P53959 839 aa4.77□□□□□ -1.65
HSP42YDR171W STP4Q07351 490 aa4.77□□□□□ -1.65
HSP42YDR171W ACF2Q12168 779 aa4.77□□□□□ -1.65
HSP42YDR171W ZRT2Q12436 422 aa4.77□□□□□ -1.65
HSP42YDR171W POM34Q12445 299 aa4.77□□□□□ -1.65
HSP42YDR171W APM4Q99186 491 aa4.77□□□□□ -1.65
HSP42YDR171W AEP2P22136 580 aa4.76□□□□□ -1.65
HSP42YDR171W BCS1P32839 456 aa4.76□□□□□ -1.65
HSP42YDR171W MOH1P38191 138 aa4.76□□□□□ -1.65
HSP42YDR171W CBR1P38626 284 aaKnown RBP4.76□□□□□ -1.65
HSP42YDR171W YIL077CP40508 320 aa4.76□□□□□ -1.65
HSP42YDR171W BUD8P41698 603 aa4.76□□□□□ -1.65
HSP42YDR171W NIT2P47016 307 aa4.76□□□□□ -1.65
HSP42YDR171W RSC1P53236 928 aa4.76□□□□□ -1.65
HSP42YDR171W MCH5Q08777 521 aa4.76□□□□□ -1.65
HSP42YDR171W SIR3P06701 978 aa4.75□□□□□ -1.65
HSP42YDR171W CDC26P14724 124 aa4.75□□□□□ -1.65
HSP42YDR171W HCA4P20448 770 aaKnown RBP4.75□□□□□ -1.65
HSP42YDR171W ATP12P22135 325 aa4.75□□□□□ -1.65
HSP42YDR171W SEC15P22224 910 aa4.75□□□□□ -1.65
HSP42YDR171W FEN2P25621 512 aaKnown RBP4.75□□□□□ -1.65
HSP42YDR171W YPT7P32939 208 aa4.75□□□□□ -1.65
HSP42YDR171W TFC4P33339 1025 aa4.75□□□□□ -1.65
HSP42YDR171W BIT2P38346 545 aa4.75□□□□□ -1.65
HSP42YDR171W IES1P43579 692 aa4.75□□□□□ -1.65
HSP42YDR171W RPS0BP46654 252 aaKnown RBP4.75□□□□□ -1.65
HSP42YDR171W RNR4P49723 345 aaKnown RBP4.75□□□□□ -1.65
HSP42YDR171W HEF3P53978 1044 aaKnown RBP4.75□□□□□ -1.65
HSP42YDR171W MLH3Q12083 715 aa4.75□□□□□ -1.65
HSP42YDR171W RNA1P11745 407 aaKnown RBP4.74□□□□□ -1.65
HSP42YDR171W KIN82P25341 720 aa4.74□□□□□ -1.65
HSP42YDR171W PRD1P25375 712 aa4.74□□□□□ -1.65
HSP42YDR171W OAR1P35731 278 aa4.74□□□□□ -1.65
HSP42YDR171W RKM3P38222 552 aa4.74□□□□□ -1.65
HSP42YDR171W YAP3P38749 330 aa4.74□□□□□ -1.65
HSP42YDR171W BDH2P39713 417 aa4.74□□□□□ -1.65
HSP42YDR171W PIG2P40187 538 aa4.74□□□□□ -1.65
HSP42YDR171W PXA1P41909 870 aa4.74□□□□□ -1.65
HSP42YDR171W RFX1P48743 811 aa4.74□□□□□ -1.65
HSP42YDR171W RRP46P53256 223 aaPredicted RBP4.74□□□□□ -1.65
HSP42YDR171W FHN1P53279 174 aa4.74□□□□□ -1.65
HSP42YDR171W SSL2Q00578 843 aa4.74□□□□□ -1.65
HSP42YDR171W TIM44Q01852 431 aa4.74□□□□□ -1.65
HSP42YDR171W SKY1Q03656 742 aa4.74□□□□□ -1.65
HSP42YDR171W HBT1Q07653 1046 aaKnown RBP4.74□□□□□ -1.65
HSP42YDR171W CHS5Q12114 671 aaKnown RBP4.74□□□□□ -1.65
HSP42YDR171W USV1Q12132 391 aa4.74□□□□□ -1.65
HSP42YDR171W ROM2P51862 1356 aaKnown RBP4.74□□□□□ -1.65
HSP42YDR171W THR1P17423 357 aaKnown RBP4.73□□□□□ -1.65
HSP42YDR171W MRC1P25588 1096 aa4.73□□□□□ -1.65
HSP42YDR171W SEC6P32844 805 aa4.73□□□□□ -1.65
HSP42YDR171W MIC60P36112 540 aa4.73□□□□□ -1.65
HSP42YDR171W COS111P38308 924 aa4.73□□□□□ -1.65
HSP42YDR171W RAD26P40352 1085 aa4.73□□□□□ -1.65
HSP42YDR171W STU2P46675 888 aa4.73□□□□□ -1.65
HSP42YDR171W PEX14P53112 341 aa4.73□□□□□ -1.65
HSP42YDR171W SPC105P53148 917 aa4.73□□□□□ -1.65
HSP42YDR171W YAP1802P53309 568 aa4.73□□□□□ -1.65
HSP42YDR171W HST1P53685 503 aa4.73□□□□□ -1.65
HSP42YDR171W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
HSP42YDR171W BCK1Q01389 1478 aa4.73□□□□□ -1.65
HSP42YDR171W RAD9P14737 1309 aa4.72□□□□□ -1.65
HSP42YDR171W COX11P19516 300 aaKnown RBP4.72□□□□□ -1.65
HSP42YDR171W PRP22P24384 1145 aaKnown RBP4.72□□□□□ -1.65
HSP42YDR171W PLC1P32383 869 aa4.72□□□□□ -1.65
HSP42YDR171W HXT4P32467 576 aa4.72□□□□□ -1.65
HSP42YDR171W RPN12P32496 274 aa4.72□□□□□ -1.65
HSP42YDR171W LTV1P34078 463 aa4.72□□□□□ -1.65
HSP42YDR171W YHR033WP38690 423 aa4.72□□□□□ -1.65
HSP42YDR171W CIN4P39110 191 aa4.72□□□□□ -1.65
HSP42YDR171W HYR1P40581 163 aaKnown RBP4.72□□□□□ -1.65
HSP42YDR171W TAF4P50105 388 aa4.72□□□□□ -1.65
HSP42YDR171W UBA2P52488 636 aa4.72□□□□□ -1.65
HSP42YDR171W ECM38Q05902 660 aaPredicted RBP4.72□□□□□ -1.65
HSP42YDR171W YFT2Q06676 274 aa4.72□□□□□ -1.65
HSP42YDR171W DUR1,2P32528 1835 aaKnown RBP4.72□□□□□ -1.65
HSP42YDR171W RAD50P12753 1312 aa4.72□□□□□ -1.65
HSP42YDR171W TOM20P35180 183 aa4.71□□□□□ -1.66
HSP42YDR171W RSM25P40496 264 aa4.71□□□□□ -1.66
HSP42YDR171W SDS3P40505 327 aa4.71□□□□□ -1.66
HSP42YDR171W CIR1P42940 261 aa4.71□□□□□ -1.66
HSP42YDR171W MPS3P47069 682 aa4.71□□□□□ -1.66
HSP42YDR171W GND2P53319 492 aa4.71□□□□□ -1.66
HSP42YDR171W MDG1P53885 366 aa4.71□□□□□ -1.66
HSP42YDR171W SMX3P54999 86 aaPredicted RBP4.71□□□□□ -1.66
HSP42YDR171W VPS60Q03390 229 aa4.71□□□□□ -1.66
HSP42YDR171W TAP42Q04372 366 aa4.71□□□□□ -1.66
HSP42YDR171W TMN2Q04562 672 aa4.71□□□□□ -1.66
HSP42YDR171W NGL1Q08213 363 aaKnown RBP4.71□□□□□ -1.66
HSP42YDR171W KAR1P11927 433 aa4.7□□□□□ -1.66
HSP42YDR171W PRP28P23394 588 aa4.7□□□□□ -1.66
HSP42YDR171W DGR2P32330 852 aa4.7□□□□□ -1.66
HSP42YDR171W MF(ALPHA)2P32435 120 aa4.7□□□□□ -1.66
HSP42YDR171W SET3P36124 751 aa4.7□□□□□ -1.66
HSP42YDR171W PEA2P40091 420 aa4.7□□□□□ -1.66
HSP42YDR171W NDC80P40460 691 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 94.7 ms