RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A GPN2Q08726 347 aaPredicted RBP0.85□□□□□ -2.27
TFB5YDR079C-A GET3Q12154 354 aaKnown RBP0.85□□□□□ -2.27
TFB5YDR079C-A YML002WP0CF17 737 aa0.84□□□□□ -2.27
TFB5YDR079C-A SSD1P24276 1250 aaKnown RBP RIP-Chip data0.84□□□□□ -2.27not detected
TFB5YDR079C-A KIN82P25341 720 aa0.84□□□□□ -2.27
TFB5YDR079C-A SEC1P30619 724 aaKnown RBP0.84□□□□□ -2.27
TFB5YDR079C-A HXT1P32465 570 aa0.84□□□□□ -2.27
TFB5YDR079C-A EFR3Q03653 782 aaKnown RBP0.84□□□□□ -2.27
TFB5YDR079C-A FMP25Q08023 583 aa0.84□□□□□ -2.27
TFB5YDR079C-A CYB2P00175 591 aa0.83□□□□□ -2.28
TFB5YDR079C-A BRN1P38170 754 aa0.83□□□□□ -2.28
TFB5YDR079C-A APN2P38207 520 aa0.83□□□□□ -2.28
TFB5YDR079C-A SET2P46995 733 aaKnown RBP0.83□□□□□ -2.28
TFB5YDR079C-A BIT61P47041 543 aa0.83□□□□□ -2.28
TFB5YDR079C-A YPT11P48559 417 aa0.83□□□□□ -2.28
TFB5YDR079C-A CUL3P53202 744 aa0.83□□□□□ -2.28
TFB5YDR079C-A ARP4P80428 489 aa0.83□□□□□ -2.28
TFB5YDR079C-A CYK3Q07533 885 aa0.83□□□□□ -2.28
TFB5YDR079C-A GSH2Q08220 491 aa0.83□□□□□ -2.28
TFB5YDR079C-A MAK32P23060 363 aa0.82□□□□□ -2.28
TFB5YDR079C-A FTH1P38310 465 aa0.82□□□□□ -2.28
TFB5YDR079C-A IMD2P38697 523 aaKnown RBP0.82□□□□□ -2.28
TFB5YDR079C-A PPE1P38796 400 aa0.82□□□□□ -2.28
TFB5YDR079C-A MNN1P39106 762 aa0.82□□□□□ -2.28
TFB5YDR079C-A YJL070CP40361 888 aa0.82□□□□□ -2.28
TFB5YDR079C-A ALG2P43636 503 aa0.82□□□□□ -2.28
TFB5YDR079C-A IMD3P50095 523 aaKnown RBP0.82□□□□□ -2.28
TFB5YDR079C-A PCL10P53124 433 aa0.82□□□□□ -2.28
TFB5YDR079C-A CEF1Q03654 590 aaPredicted RBP0.82□□□□□ -2.28
TFB5YDR079C-A PNO1Q99216 274 aaKnown RBP0.82□□□□□ -2.28
TFB5YDR079C-A YKR018CP36114 725 aa0.81□□□□□ -2.28
TFB5YDR079C-A CIN1P40987 1014 aa0.81□□□□□ -2.28
TFB5YDR079C-A NPY1P53164 384 aa0.81□□□□□ -2.28
TFB5YDR079C-A CWC24P53769 259 aa0.81□□□□□ -2.28
TFB5YDR079C-A PFA4Q12006 378 aa0.81□□□□□ -2.28
TFB5YDR079C-A TGS1Q12052 315 aa0.81□□□□□ -2.28
TFB5YDR079C-A YOR131CQ12486 218 aa0.81□□□□□ -2.28
TFB5YDR079C-A FAB1P34756 2278 aa0.81□□□□□ -2.28
TFB5YDR079C-A TOM70P07213 617 aaKnown RBP0.8□□□□□ -2.28
TFB5YDR079C-A PMS1P14242 873 aa0.8□□□□□ -2.28
TFB5YDR079C-A GSH1P32477 678 aa0.8□□□□□ -2.28
TFB5YDR079C-A YKR051WP36142 418 aa0.8□□□□□ -2.28
TFB5YDR079C-A YPT10P38146 199 aa0.8□□□□□ -2.28
TFB5YDR079C-A PTH1P38876 190 aaKnown RBP0.8□□□□□ -2.28
TFB5YDR079C-A SPF1P39986 1215 aaKnown RBP0.8□□□□□ -2.28
TFB5YDR079C-A PCL6P40038 420 aa0.8□□□□□ -2.28
TFB5YDR079C-A TMN3P40071 706 aa0.8□□□□□ -2.28
TFB5YDR079C-A ILS1P09436 1072 aaKnown RBP0.79□□□□□ -2.28
TFB5YDR079C-A SEC18P18759 758 aaKnown RBP0.79□□□□□ -2.28
TFB5YDR079C-A CNA1P23287 553 aa0.79□□□□□ -2.28
TFB5YDR079C-A TAH18Q12181 623 aa0.79□□□□□ -2.28
TFB5YDR079C-A SOD1P00445 154 aaKnown RBP0.78□□□□□ -2.28
TFB5YDR079C-A QRI7P43122 407 aa0.78□□□□□ -2.28
TFB5YDR079C-A YPI1P43587 155 aa0.78□□□□□ -2.28
TFB5YDR079C-A RBG2P53295 368 aaKnown RBP0.78□□□□□ -2.28
TFB5YDR079C-A BRE5P53741 515 aaKnown RBP0.78□□□□□ -2.28
TFB5YDR079C-A ISA1Q07821 250 aaPredicted RBP0.78□□□□□ -2.28
TFB5YDR079C-A MRN1Q08925 612 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28not detected
TFB5YDR079C-A AHA1Q12449 350 aaKnown RBP0.78□□□□□ -2.28
TFB5YDR079C-A RRI1Q12468 440 aa0.78□□□□□ -2.28
TFB5YDR079C-A YDL012CQ12489 107 aa0.78□□□□□ -2.28
TFB5YDR079C-A HOP1P20050 605 aa0.77□□□□□ -2.29
TFB5YDR079C-A PRE5P40302 234 aaKnown RBP0.77□□□□□ -2.29
TFB5YDR079C-A ERP6P53198 216 aa0.77□□□□□ -2.29
TFB5YDR079C-A BOR1P53838 576 aa0.77□□□□□ -2.29
TFB5YDR079C-A SVF1Q05515 481 aa0.77□□□□□ -2.29
TFB5YDR079C-A ECM22Q05958 814 aaPredicted RBP0.77□□□□□ -2.29
TFB5YDR079C-A BUD14P27637 709 aa0.76□□□□□ -2.29
TFB5YDR079C-A SRO77P38163 1010 aa0.76□□□□□ -2.29
TFB5YDR079C-A YGR054WP53235 642 aaKnown RBP0.76□□□□□ -2.29
TFB5YDR079C-A FDC1Q03034 503 aa0.76□□□□□ -2.29
TFB5YDR079C-A SPO75Q07798 868 aa0.76□□□□□ -2.29
TFB5YDR079C-A NAT1P12945 854 aaKnown RBP0.75□□□□□ -2.29
TFB5YDR079C-A FRS1P15624 595 aaKnown RBP0.75□□□□□ -2.29
TFB5YDR079C-A RPL8BP29453 256 aaKnown RBP0.75□□□□□ -2.29
TFB5YDR079C-A PRO3P32263 286 aaKnown RBP0.75□□□□□ -2.29
TFB5YDR079C-A MNN2P38069 597 aa0.75□□□□□ -2.29
TFB5YDR079C-A EFM2P38347 419 aa0.75□□□□□ -2.29
TFB5YDR079C-A VBA4Q04602 768 aaKnown RBP0.75□□□□□ -2.29
TFB5YDR079C-A APL5Q08951 932 aaKnown RBP0.75□□□□□ -2.29
TFB5YDR079C-A PIN2Q12057 282 aa0.75□□□□□ -2.29
TFB5YDR079C-A MIH1P23748 554 aa0.74□□□□□ -2.29
TFB5YDR079C-A PET127P32606 800 aa0.74□□□□□ -2.29
TFB5YDR079C-A CCL1P37366 393 aa0.74□□□□□ -2.29
TFB5YDR079C-A GSM1P42950 618 aa0.74□□□□□ -2.29
TFB5YDR079C-A YNL144CP53907 740 aa0.74□□□□□ -2.29
TFB5YDR079C-A ARA2Q04212 335 aa0.74□□□□□ -2.29
TFB5YDR079C-A TDA5Q06417 326 aaKnown RBP0.74□□□□□ -2.29
TFB5YDR079C-A YLL056CQ12177 298 aa0.74□□□□□ -2.29
TFB5YDR079C-A NAP1P25293 417 aaKnown RBP0.73□□□□□ -2.29
TFB5YDR079C-A ARE1P25628 610 aa0.73□□□□□ -2.29
TFB5YDR079C-A DHR2P36009 735 aaPredicted RBP0.73□□□□□ -2.29
TFB5YDR079C-A MCD4P36051 919 aa0.73□□□□□ -2.29
TFB5YDR079C-A YJR061WP40355 935 aa0.73□□□□□ -2.29
TFB5YDR079C-A YNL058CP53947 316 aa0.73□□□□□ -2.29
TFB5YDR079C-A TIM50Q02776 476 aa0.73□□□□□ -2.29
TFB5YDR079C-A USA1Q03714 838 aa0.73□□□□□ -2.29
TFB5YDR079C-A VHS3Q08438 674 aa0.73□□□□□ -2.29
TFB5YDR079C-A PPT2Q12036 173 aa0.73□□□□□ -2.29
TFB5YDR079C-A NIC96P34077 839 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms