RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W NOP9P47077 666 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W MTD1Q02046 320 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W SLU7Q02775 382 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W NSE5Q03718 556 aa2.04□□□□□ -2.08
MSH5YDL154W FRE5Q08908 694 aa2.04□□□□□ -2.08
MSH5YDL154W GPR1Q12361 961 aa2.04□□□□□ -2.08
MSH5YDL154W PEX1P24004 1043 aa2.04□□□□□ -2.08
MSH5YDL154W ERG6P25087 383 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W ELM1P32801 640 aa2.04□□□□□ -2.08
MSH5YDL154W CBR1P38626 284 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W UBP5P39944 805 aa2.04□□□□□ -2.08
MSH5YDL154W SCS2P40075 244 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W MRPS35P53292 345 aa2.04□□□□□ -2.08
MSH5YDL154W CEF1Q03654 590 aaPredicted RBP2.04□□□□□ -2.08
MSH5YDL154W ECM16Q04217 1267 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W IRC13Q08630 104 aa2.04□□□□□ -2.08
MSH5YDL154W MCH5Q08777 521 aa2.04□□□□□ -2.08
MSH5YDL154W ZRT2Q12436 422 aa2.04□□□□□ -2.08
MSH5YDL154W HRP1Q99383 534 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W ABF1P14164 731 aa2.03□□□□□ -2.08
MSH5YDL154W NTH1P32356 751 aa2.03□□□□□ -2.08
MSH5YDL154W TGL1P34163 548 aa2.03□□□□□ -2.08
MSH5YDL154W YKL222CP35995 705 aa2.03□□□□□ -2.08
MSH5YDL154W COS111P38308 924 aa2.03□□□□□ -2.08
MSH5YDL154W SFB3P38810 929 aa2.03□□□□□ -2.08
MSH5YDL154W NUP60P39705 539 aa2.03□□□□□ -2.08
MSH5YDL154W BIT61P47041 543 aa2.03□□□□□ -2.08
MSH5YDL154W PHO23P50947 330 aa2.03□□□□□ -2.08
MSH5YDL154W TEP1P53916 434 aa2.03□□□□□ -2.08
MSH5YDL154W RNT1Q02555 471 aa2.03□□□□□ -2.08
MSH5YDL154W RRP6Q12149 733 aaKnown RBP2.03□□□□□ -2.08
MSH5YDL154W VPS5Q92331 675 aa2.03□□□□□ -2.08
MSH5YDL154W ALG7P07286 448 aa2.03□□□□□ -2.09
MSH5YDL154W PWP2P25635 923 aaKnown RBP2.03□□□□□ -2.09
MSH5YDL154W CTS1P29029 562 aa2.03□□□□□ -2.09
MSH5YDL154W VPS24P36095 224 aaKnown RBP2.03□□□□□ -2.09
MSH5YDL154W GET2P40056 285 aa2.03□□□□□ -2.09
MSH5YDL154W GID8P40208 455 aa2.03□□□□□ -2.09
MSH5YDL154W BUD8P41698 603 aa2.03□□□□□ -2.09
MSH5YDL154W IES1P43579 692 aa2.03□□□□□ -2.09
MSH5YDL154W CNM67P53865 581 aaKnown RBP2.03□□□□□ -2.09
MSH5YDL154W TGL2P54857 326 aa2.03□□□□□ -2.09
MSH5YDL154W CHS5Q12114 671 aaKnown RBP2.03□□□□□ -2.09
MSH5YDL154W YOL114CQ12322 202 aa2.03□□□□□ -2.09
MSH5YDL154W CTT1P06115 562 aa2.02□□□□□ -2.09
MSH5YDL154W PCK1P10963 549 aa2.02□□□□□ -2.09
MSH5YDL154W ACO1P19414 778 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
MSH5YDL154W CBP3P21560 335 aa2.02□□□□□ -2.09
MSH5YDL154W TRX2P22803 104 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W FEN2P25621 512 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W YHR131CP38835 850 aa2.02□□□□□ -2.09
MSH5YDL154W FMO1P38866 432 aa2.02□□□□□ -2.09
MSH5YDL154W PMC1P38929 1173 aaPredicted RBP2.02□□□□□ -2.09
MSH5YDL154W LYS9P38999 446 aa2.02□□□□□ -2.09
MSH5YDL154W SSP120P39931 234 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W TMN3P40071 706 aa2.02□□□□□ -2.09
MSH5YDL154W PRM2P40534 656 aa2.02□□□□□ -2.09
MSH5YDL154W YAP1802P53309 568 aa2.02□□□□□ -2.09
MSH5YDL154W YCG1Q06680 1035 aa2.02□□□□□ -2.09
MSH5YDL154W YLL066CQ99208 1374 aa2.02□□□□□ -2.09
MSH5YDL154W SPT7P35177 1332 aa2.02□□□□□ -2.09
MSH5YDL154W PMA1P05030 918 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W VAS1P07806 1104 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W HMG2P12684 1045 aa2.02□□□□□ -2.09
MSH5YDL154W CDC26P14724 124 aa2.02□□□□□ -2.09
MSH5YDL154W SEC18P18759 758 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W DCG1P32460 244 aa2.02□□□□□ -2.09
MSH5YDL154W BCS1P32839 456 aa2.02□□□□□ -2.09
MSH5YDL154W APM3P38153 483 aa2.02□□□□□ -2.09
MSH5YDL154W FUI1P38196 639 aa2.02□□□□□ -2.09
MSH5YDL154W BCD1P38772 366 aa2.02□□□□□ -2.09
MSH5YDL154W AIM21P40563 679 aa2.02□□□□□ -2.09
MSH5YDL154W RCR2Q03446 210 aaKnown RBP2.02□□□□□ -2.09
MSH5YDL154W THI22Q06490 572 aa2.02□□□□□ -2.09
MSH5YDL154W ESC8Q08119 714 aa2.02□□□□□ -2.09
MSH5YDL154W NTO1Q12311 748 aa2.02□□□□□ -2.09
MSH5YDL154W ARP7Q12406 477 aa2.02□□□□□ -2.09
MSH5YDL154W GEA1P47102 1408 aaPredicted RBP2.01□□□□□ -2.09
MSH5YDL154W PRP28P23394 588 aa2.01□□□□□ -2.09
MSH5YDL154W YBR053CP38235 358 aa2.01□□□□□ -2.09
MSH5YDL154W IRC5P43610 853 aa2.01□□□□□ -2.09
MSH5YDL154W YJL163CP46996 555 aa2.01□□□□□ -2.09
MSH5YDL154W IML2P47031 731 aa2.01□□□□□ -2.09
MSH5YDL154W TAH11P47112 604 aa2.01□□□□□ -2.09
MSH5YDL154W RFX1P48743 811 aa2.01□□□□□ -2.09
MSH5YDL154W PAN2P53010 1115 aaPredicted RBP2.01□□□□□ -2.09
MSH5YDL154W RIA1P53893 1110 aa2.01□□□□□ -2.09
MSH5YDL154W ADY4Q05955 493 aa2.01□□□□□ -2.09
MSH5YDL154W YFT2Q06676 274 aa2.01□□□□□ -2.09
MSH5YDL154W LAS17Q12446 633 aa2.01□□□□□ -2.09
MSH5YDL154W YKL033W-AQ86ZR7 236 aa2.01□□□□□ -2.09
MSH5YDL154W SSM4P40318 1319 aa2.01□□□□□ -2.09
MSH5YDL154W TUF1P02992 437 aaKnown RBP2.01□□□□□ -2.09
MSH5YDL154W PPR1P07272 904 aaPredicted RBP2.01□□□□□ -2.09
MSH5YDL154W TUP1P16649 713 aa2.01□□□□□ -2.09
MSH5YDL154W MF(ALPHA)2P32435 120 aa2.01□□□□□ -2.09
MSH5YDL154W PET309P32522 965 aaPredicted RBP2.01□□□□□ -2.09
MSH5YDL154W MRPL36P36531 177 aa2.01□□□□□ -2.09
MSH5YDL154W PCL5P38794 229 aa2.01□□□□□ -2.09
MSH5YDL154W LNP1P38878 278 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms