RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	URA8	P38627	578 aa	Predicted RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	RAD55	P38953	406 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	RTT102	P53330	157 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	CYK3	Q07533	885 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	NHA1	Q99271	985 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	HEM2	P05373	342 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	PLC1	P32383	869 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	PRP18	P33411	251 aa	Predicted RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	SNZ3	P43545	298 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	BNA3	P47039	444 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	EFM5	P53200	248 aa	Known RBP	3.91	□□□□□ -1.78
RPO21	YDL140C	MKC7	P53379	596 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	SNZ2	P53824	298 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	ACS1	Q01574	713 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	SPH1	Q06160	661 aa		3.91	□□□□□ -1.78
RPO21	YDL140C	SEC18	P18759	758 aa	Known RBP	3.9	□□□□□ -1.78
RPO21	YDL140C	OAR1	P35731	278 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	REF2	P42073	533 aa	Predicted RBP	3.9	□□□□□ -1.78
RPO21	YDL140C	YJL107C	P42947	387 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	NUP53	Q03790	475 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	ATG29	Q12092	213 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	PDR1	P12383	1068 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	RER2	P35196	286 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	KIC1	P38692	1080 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	SSY5	P47002	699 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	LOH1	P47055	219 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	SPO75	Q07798	868 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	SUT2	Q12286	268 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	MEX67	Q99257	599 aa	Known RBP	3.9	□□□□□ -1.78
RPO21	YDL140C	VMR1	P38735	1592 aa		3.9	□□□□□ -1.78
RPO21	YDL140C	CDC24	P11433	854 aa	Predicted RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	PEP5	P12868	1029 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	DCG1	P32460	244 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	BET3	P36149	193 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	PMC1	P38929	1173 aa	Predicted RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	PTC2	P39966	464 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	NOP16	P40007	231 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	MVP1	P40959	511 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	TDA5	Q06417	326 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	HRT3	Q12347	344 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	MOD5	P07884	428 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	NUC1	P08466	329 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	HSP60	P19882	572 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	CAD1	P24813	409 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	MGT1	P26188	188 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	SBA1	P28707	216 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	MUD1	P32605	298 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	RPT5	P33297	434 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	PIK1	P39104	1066 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	NPT1	P39683	429 aa	Known RBP	3.9	□□□□□ -1.79
RPO21	YDL140C	STL1	P39932	569 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	PAC11	P40960	533 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	MIC19	P43594	170 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	HLJ1	P48353	224 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	ERP6	P53198	216 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	SWC4	P53201	476 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	SAC3	P46674	1301 aa		3.9	□□□□□ -1.79
RPO21	YDL140C	STE12	P13574	688 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	PFK1	P16861	987 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	CKI1	P20485	582 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	TPS2	P31688	896 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	ELO3	P40319	345 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	SEC26	P41810	973 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	HDA1	P53973	706 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	RRD2	Q12461	358 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	MHF1	Q3E835	90 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	SIR3	P06701	978 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	CMP2	P14747	604 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	MDJ1	P35191	511 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	CAB3	P36076	571 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	LSM5	P40089	93 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	YPL277C	Q08989	487 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	ATG34	Q12292	412 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	GAL80	P04387	435 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	MNE1	P24720	663 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	OTU2	P38747	307 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	YHI9	P38765	294 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	OSW5	P40219	148 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	CDC55	Q00362	526 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	ARO80	Q04052	950 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	RLP24	Q07915	199 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	MLH3	Q12083	715 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	NOT5	Q12514	560 aa	Predicted RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	ARG4	P04076	463 aa	Predicted RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	AAD3	P25612	363 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	RAD24	P32641	659 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	YSW1	P38280	609 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	DYS1	P38791	387 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	NPP2	P39997	493 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	MAD2	P40958	196 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	TOS3	P43637	560 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	AAD10	P47182	288 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	PBP1	P53297	722 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	NOP15	P53927	220 aa	Predicted RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	DOT1	Q04089	582 aa	Known RBP	3.89	□□□□□ -1.79
RPO21	YDL140C	RRG8	Q06109	277 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	THI73	Q07904	523 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	YEL077C	Q3E7X8	1277 aa		3.89	□□□□□ -1.79
RPO21	YDL140C	TRS33	Q99394	268 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms