RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	BSC2	Q05611	235 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	YFT2	Q06676	274 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	NDE2	Q07500	545 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	DDC1	Q08949	612 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	YPL225W	Q08971	146 aa	Known RBP	5.97	□□□□□ -1.45
SUB2	YDL084W	VPS54	Q12071	889 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	IES3	Q12345	250 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	SRF1	Q12516	437 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	SET6	Q12529	373 aa		5.97	□□□□□ -1.45
SUB2	YDL084W	WHI2	P12611	486 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	RDS2	P19541	446 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	UTR1	P21373	530 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	AFT1	P22149	690 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	GRX1	P25373	110 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	RPS7A	P26786	190 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	CMK1	P27466	446 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	ICL1	P28240	557 aa	Predicted RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	NPL6	P32832	435 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	DYS1	P38791	387 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	SSO2	P39926	295 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	GDI1	P39958	451 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	YER184C	P39961	794 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	CAB2	P40506	365 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	STB1	P42845	420 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	CLA4	P48562	842 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	PIB2	P53191	635 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	YNL034W	P53963	612 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	YNL018C	P53976	612 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	ARP4	P80428	489 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	TFB2	Q02939	513 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	RMD1	Q03441	430 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	HMO1	Q03973	246 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	YCS4	Q06156	1176 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	YLR455W	Q06188	304 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	VPS74	Q06385	345 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	MRL1	Q06815	381 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	YLR031W	Q07978	186 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	NTG2	Q08214	380 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	RPN8	Q08723	338 aa	Known RBP	5.96	□□□□□ -1.46
SUB2	YDL084W	SOG2	Q08817	791 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	TY3A-G	Q12173	290 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	RBD2	Q12270	262 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	TY3A-I	Q99219	290 aa		5.96	□□□□□ -1.46
SUB2	YDL084W	SRB8	P25648	1427 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	SPP41	P38904	1435 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	CBP2	P03874	630 aa	Predicted RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	MET3	P08536	511 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	TUP1	P16649	713 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	CLB3	P24870	427 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	SED4	P25365	1065 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	YCR016W	P25617	290 aa	Known RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	GAR1	P28007	205 aa	Known RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	GCD11	P32481	527 aa	Known RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	PAH1	P32567	862 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	RAD5	P32849	1169 aa	Predicted RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	TYE7	P33122	291 aa	Predicted RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	TGL4	P36165	910 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	MMS4	P38257	691 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	BSD2	P38356	321 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	OSH7	P38755	437 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	FYV10	P40492	516 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	RTS2	P40962	232 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	REF2	P42073	533 aa	Predicted RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	STB2	P46679	850 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	MTO1	P53070	669 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	KTR6	P54070	446 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	RLI1	Q03195	608 aa	Known RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	VPS64	Q03944	604 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	GIM5	Q04493	163 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	UFO1	Q04511	668 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	TDA9	Q04545	1251 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	SNA4	Q07549	140 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	SIL1	Q08199	421 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	PUS7	Q08647	676 aa	Known RBP	5.95	□□□□□ -1.46
SUB2	YDL084W	ARP7	Q12406	477 aa		5.95	□□□□□ -1.46
SUB2	YDL084W	MHP1	P43638	1398 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	CYT1	P07143	309 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	CDC42	P19073	191 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	UBA1	P22515	1024 aa	Known RBP	5.94	□□□□□ -1.46
SUB2	YDL084W	CAD1	P24813	409 aa	Known RBP	5.94	□□□□□ -1.46
SUB2	YDL084W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
SUB2	YDL084W	RPC19	P28000	142 aa	Known RBP	5.94	□□□□□ -1.46
SUB2	YDL084W	PET309	P32522	965 aa	Predicted RBP	5.94	□□□□□ -1.46
SUB2	YDL084W	YBL010C	P32788	280 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	LOS1	P33418	1100 aa	Predicted RBP	5.94	□□□□□ -1.46
SUB2	YDL084W	YKL069W	P36088	180 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	ERT1	P38140	529 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	YBR071W	P38243	211 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	SWC5	P38326	303 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	ORC6	P38826	435 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	FLC2	P39719	783 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	OSW5	P40219	148 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	UFE1	P41834	346 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	LOH1	P47055	219 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	YJR098C	P47139	656 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	NIT3	P49954	291 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	PSP2	P50109	593 aa	Known RBP	5.94	□□□□□ -1.46
SUB2	YDL084W	YGR012W	P53206	393 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	MEP3	P53390	489 aa		5.94	□□□□□ -1.46
SUB2	YDL084W	IRC4	Q03036	179 aa		5.94	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms