RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGD1	YBR260C	RSC2	Q06488	889 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	VPS36	Q06696	566 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	MCH5	Q08777	521 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	SPE3	Q12074	293 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	YLR278C	Q05854	1341 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	MET6	P05694	767 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	ERG12	P07277	443 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	RED1	P14291	827 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	VPS33	P20795	691 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	PEX3	P28795	441 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	PTP2	P29461	750 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	PRP19	P32523	503 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	SLX5	P32828	619 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	STE5	P32917	917 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	ARC19	P33204	171 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	RRT2	P38332	387 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	SPL2	P38839	148 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	CCT6	P39079	546 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	UBP7	P40453	1071 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	PRK1	P40494	810 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	MRK1	P50873	501 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	RTC4	P53850	401 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	HXT15	P54854	567 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	EMI2	Q04409	500 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	URC2	Q04411	772 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	NNT1	Q05874	261 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	PMT7	Q06644	662 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	MDM36	Q06820	579 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	BRE4	Q07660	1125 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	VHS3	Q08438	674 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	YLR053C	Q12026	108 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	THP3	Q12049	470 aa	Known RBP	6.26	□□□□□ -1.41
RGD1	YBR260C	YOR342C	Q12182	319 aa		6.26	□□□□□ -1.41
RGD1	YBR260C	CCP1	P00431	361 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	GCR1	P07261	785 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	SPS1	P08458	490 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	MSD1	P15179	658 aa	Known RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	IDI1	P15496	288 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	RPB4	P20433	221 aa	Predicted RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	KIP2	P28743	706 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	SRP101	P32916	621 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	MMS21	P38632	267 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	MTG2	P38860	518 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	YDR089W	P38966	869 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	HAL5	P38970	855 aa	Known RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	END3	P39013	349 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	VMA7	P39111	118 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	UBP5	P39944	805 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	CSM2	P40465	213 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	RPL17B	P46990	184 aa	Known RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	APS3	P47064	194 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	BPL1	P48445	690 aa	Predicted RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	RIM21	P48565	533 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	MTG1	Q03151	367 aa	Predicted RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	HER2	Q03557	464 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	ENT2	Q05785	613 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	ADY4	Q05955	493 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	SMD2	Q06217	110 aa	Known RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	YPL191C	Q08930	360 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	CMP2	P14747	604 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
RGD1	YBR260C	STF2	P16965	84 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	VPS3	P23643	1011 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	COQ8	P27697	501 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	CAP1	P28495	268 aa	Known RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	ZIP1	P31111	875 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	STB6	P36085	766 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	RDH54	P38086	958 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	YBR285W	P38354	144 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	DDI1	P40087	428 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	ESL1	P40456	1118 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	MDV1	P47025	714 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	MET13	P53128	600 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	YTP1	P53584	459 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	NAN1	Q02931	896 aa	Known RBP	6.25	□□□□□ -1.41
RGD1	YBR260C	SND1	Q04007	877 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	YCS4	Q06156	1176 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	YLR031W	Q07978	186 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	HSP42	Q12329	375 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	STB3	Q12427	513 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	FMP16	Q12497	93 aa		6.25	□□□□□ -1.41
RGD1	YBR260C	FKS3	Q04952	1785 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	GPM1	P00950	247 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	SNF4	P12904	322 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	GRX2	P17695	143 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	DBP3	P20447	523 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	RPA135	P22138	1203 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	TPS2	P31688	896 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	BLI1	P35727	113 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	GLY1	P37303	387 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	ATP3	P38077	311 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	HIS2	P38635	335 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	YHI9	P38765	294 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	YER186C	P40101	306 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	UTP18	P40362	594 aa	Predicted RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	LIA1	P47120	325 aa	Known RBP	6.24	□□□□□ -1.41
RGD1	YBR260C	RSM26	P47141	266 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	NMA2	P53204	395 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	COG2	P53271	262 aa		6.24	□□□□□ -1.41
RGD1	YBR260C	CNM67	P53865	581 aa	Known RBP	6.24	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms