RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	USA1	Q03714	838 aa		5.56	□□□□□ -1.52
UBS1	YBR165W	YDL073W	Q07454	984 aa		5.56	□□□□□ -1.52
UBS1	YBR165W	TRE2	Q08693	809 aa		5.56	□□□□□ -1.52
UBS1	YBR165W	ZPS1	Q12512	249 aa		5.56	□□□□□ -1.52
UBS1	YBR165W	PMA2	P19657	947 aa		5.55	□□□□□ -1.52
UBS1	YBR165W	BUD17	P53727	317 aa		5.55	□□□□□ -1.52
UBS1	YBR165W	YNL018C	P53976	612 aa		5.55	□□□□□ -1.52
UBS1	YBR165W	YPL216W	Q08964	1102 aa		5.55	□□□□□ -1.52
UBS1	YBR165W	CPA2	P03965	1118 aa	Known RBP	5.54	□□□□□ -1.52
UBS1	YBR165W	VPS33	P20795	691 aa		5.54	□□□□□ -1.52
UBS1	YBR165W	AAD3	P25612	363 aa		5.54	□□□□□ -1.52
UBS1	YBR165W	PEA2	P40091	420 aa		5.54	□□□□□ -1.52
UBS1	YBR165W	SQS1	P53866	767 aa	Known RBP	5.54	□□□□□ -1.52
UBS1	YBR165W	YEL076C-A	P0CX16	216 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	YLR464W	P0CX17	216 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	PAF1	P38351	445 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	YJL193W	P39542	402 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	YEL076C	P39971	216 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	SPC105	P53148	917 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	COQ6	P53318	479 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	SEG1	Q04279	960 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	HOF1	Q05080	669 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	TMA17	Q12513	150 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	VPS5	Q92331	675 aa		5.53	□□□□□ -1.52
UBS1	YBR165W	RPL7A	P05737	244 aa	Known RBP	5.52	□□□□□ -1.53
UBS1	YBR165W	WHI2	P12611	486 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	MDM10	P18409	493 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	COX11	P19516	300 aa	Known RBP	5.52	□□□□□ -1.53
UBS1	YBR165W	CWH43	P25618	953 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	HEM12	P32347	362 aa	Predicted RBP	5.52	□□□□□ -1.53
UBS1	YBR165W	LOT5	P34234	306 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	RIM4	P38741	713 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	EMP65	P40085	556 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	SLD3	P53135	668 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	MTD1	Q02046	320 aa	Known RBP	5.52	□□□□□ -1.53
UBS1	YBR165W	TGS1	Q12052	315 aa		5.52	□□□□□ -1.53
UBS1	YBR165W	RPL7B	Q12213	244 aa	Known RBP	5.52	□□□□□ -1.53
UBS1	YBR165W	CCL1	P37366	393 aa		5.51	□□□□□ -1.53
UBS1	YBR165W	YPT10	P38146	199 aa		5.51	□□□□□ -1.53
UBS1	YBR165W	TAX4	P47030	604 aa		5.51	□□□□□ -1.53
UBS1	YBR165W	COG6	P53959	839 aa		5.51	□□□□□ -1.53
UBS1	YBR165W	YOR378W	Q08902	515 aa		5.51	□□□□□ -1.53
UBS1	YBR165W	ENP1	P38333	483 aa	Known RBP	5.5	□□□□□ -1.53
UBS1	YBR165W	PIP2	P52960	996 aa		5.5	□□□□□ -1.53
UBS1	YBR165W	SAP4	P53036	818 aa		5.5	□□□□□ -1.53
UBS1	YBR165W	MNT2	P53059	558 aa		5.5	□□□□□ -1.53
UBS1	YBR165W	RIM13	Q03792	727 aa		5.5	□□□□□ -1.53
UBS1	YBR165W	PGK1	P00560	416 aa	Known RBP	5.49	□□□□□ -1.53
UBS1	YBR165W	ERG11	P10614	530 aa		5.49	□□□□□ -1.53
UBS1	YBR165W	YJR120W	P47157	116 aa		5.49	□□□□□ -1.53
UBS1	YBR165W	PEX15	Q08215	383 aa		5.49	□□□□□ -1.53
UBS1	YBR165W	CWC2	Q12046	339 aa	Predicted RBP	5.49	□□□□□ -1.53
UBS1	YBR165W	AI5_ALPHA	Q9ZZX1	630 aa		5.49	□□□□□ -1.53
UBS1	YBR165W	YMR084W	A2P2R3	262 aa		5.48	□□□□□ -1.53
UBS1	YBR165W	TSR4	P25040	408 aa		5.48	□□□□□ -1.53
UBS1	YBR165W	HOT13	P36078	116 aa		5.48	□□□□□ -1.53
UBS1	YBR165W	EAF5	P39995	279 aa		5.48	□□□□□ -1.53
UBS1	YBR165W	ATG36	P46983	293 aa		5.48	□□□□□ -1.53
UBS1	YBR165W	GFD1	Q04839	188 aa	Known RBP	5.48	□□□□□ -1.53
UBS1	YBR165W	MBR1	P23493	339 aa		5.47	□□□□□ -1.53
UBS1	YBR165W	DSS4	P32601	143 aa		5.47	□□□□□ -1.53
UBS1	YBR165W	STL1	P39932	569 aa		5.47	□□□□□ -1.53
UBS1	YBR165W	ECM38	Q05902	660 aa	Predicted RBP	5.47	□□□□□ -1.53
UBS1	YBR165W	SEC12	P11655	471 aa		5.46	□□□□□ -1.54
UBS1	YBR165W	RNR3	P21672	869 aa	Known RBP	5.46	□□□□□ -1.54
UBS1	YBR165W	SSP120	P39931	234 aa	Known RBP	5.46	□□□□□ -1.54
UBS1	YBR165W	LTP1	P40347	161 aa		5.46	□□□□□ -1.54
UBS1	YBR165W	MAD2	P40958	196 aa		5.46	□□□□□ -1.54
UBS1	YBR165W	BNA3	P47039	444 aa	Known RBP	5.46	□□□□□ -1.54
UBS1	YBR165W	HOL1	P53389	586 aa		5.46	□□□□□ -1.54
UBS1	YBR165W	AAC1	P04710	309 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	PCK1	P10963	549 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	APN1	P22936	367 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	MRC1	P25588	1096 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	RPC34	P32910	317 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	EXO1	P39875	702 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	YFL015C	P43578	164 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	MDR1	P53258	950 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	DIN7	Q12086	430 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	SLX4	Q12098	748 aa		5.45	□□□□□ -1.54
UBS1	YBR165W	RTK1	Q12100	620 aa	Predicted RBP	5.45	□□□□□ -1.54
UBS1	YBR165W	HEM1	P09950	548 aa	Predicted RBP	5.44	□□□□□ -1.54
UBS1	YBR165W	ARG1	P22768	420 aa		5.44	□□□□□ -1.54
UBS1	YBR165W	PLC1	P32383	869 aa		5.44	□□□□□ -1.54
UBS1	YBR165W	YNR071C	P53757	342 aa		5.44	□□□□□ -1.54
UBS1	YBR165W	KAR1	P11927	433 aa		5.43	□□□□□ -1.54
UBS1	YBR165W	PRP45	P28004	379 aa	Predicted RBP	5.43	□□□□□ -1.54
UBS1	YBR165W	PET309	P32522	965 aa	Predicted RBP	5.43	□□□□□ -1.54
UBS1	YBR165W	OPT1	P40897	799 aa		5.43	□□□□□ -1.54
UBS1	YBR165W	SNM1	P40993	198 aa		5.43	□□□□□ -1.54
UBS1	YBR165W	TDA10	P42938	290 aa		5.43	□□□□□ -1.54
UBS1	YBR165W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
UBS1	YBR165W	AFT2	Q08957	416 aa		5.43	□□□□□ -1.54
UBS1	YBR165W	URA3	P03962	267 aa		5.42	□□□□□ -1.54
UBS1	YBR165W	AQY1	P0CD91	305 aa		5.42	□□□□□ -1.54
UBS1	YBR165W	NUP1	P20676	1076 aa		5.42	□□□□□ -1.54
UBS1	YBR165W	CBP3	P21560	335 aa		5.42	□□□□□ -1.54
UBS1	YBR165W	CDC5	P32562	705 aa		5.42	□□□□□ -1.54
UBS1	YBR165W	TFC4	P33339	1025 aa		5.42	□□□□□ -1.54
UBS1	YBR165W	PUS4	P48567	403 aa	Known RBP	5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms