RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C CCL1P37366 393 aa3.58□□□□□ -1.84
RPB5YBR154C YHR033WP38690 423 aa3.58□□□□□ -1.84
RPB5YBR154C EXO1P39875 702 aa3.58□□□□□ -1.84
RPB5YBR154C IRC8P47046 822 aa3.58□□□□□ -1.84
RPB5YBR154C IDP3P53982 420 aaKnown RBP3.58□□□□□ -1.84
RPB5YBR154C RPS15Q01855 142 aaKnown RBP3.58□□□□□ -1.84
RPB5YBR154C RSC9Q03124 581 aa3.58□□□□□ -1.84
RPB5YBR154C ENT2Q05785 613 aa3.58□□□□□ -1.84
RPB5YBR154C BSP1Q06604 576 aa3.58□□□□□ -1.84
RPB5YBR154C PRS5Q12265 496 aaKnown RBP3.58□□□□□ -1.84
RPB5YBR154C GLN4P13188 809 aaKnown RBP3.57□□□□□ -1.84
RPB5YBR154C ACO1P19414 778 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
RPB5YBR154C PPG1P32838 368 aa3.57□□□□□ -1.84
RPB5YBR154C CDS1P38221 457 aa3.57□□□□□ -1.84
RPB5YBR154C PCI8P40512 444 aa3.57□□□□□ -1.84
RPB5YBR154C GZF3P42944 551 aaKnown RBP3.57□□□□□ -1.84
RPB5YBR154C YFL015CP43578 164 aa3.57□□□□□ -1.84
RPB5YBR154C SCW4P53334 386 aaKnown RBP3.57□□□□□ -1.84
RPB5YBR154C UTP14Q04500 899 aaKnown RBP3.57□□□□□ -1.84
RPB5YBR154C YCG1Q06680 1035 aa3.57□□□□□ -1.84
RPB5YBR154C RDL1Q12305 139 aaKnown RBP3.57□□□□□ -1.84
RPB5YBR154C OAF3P36023 863 aa3.56□□□□□ -1.84
RPB5YBR154C LRO1P40345 661 aa3.56□□□□□ -1.84
RPB5YBR154C YIL092WP40497 633 aa3.56□□□□□ -1.84
RPB5YBR154C MEP2P41948 499 aa3.56□□□□□ -1.84
RPB5YBR154C HLJ1P48353 224 aa3.56□□□□□ -1.84
RPB5YBR154C SAP4P53036 818 aa3.56□□□□□ -1.84
RPB5YBR154C PTA1Q01329 785 aaPredicted RBP3.56□□□□□ -1.84
RPB5YBR154C WAR1Q03631 944 aa3.56□□□□□ -1.84
RPB5YBR154C YHM2Q04013 314 aa3.56□□□□□ -1.84
RPB5YBR154C ARR3Q06598 404 aa3.56□□□□□ -1.84
RPB5YBR154C RPS21BQ3E754 87 aaKnown RBP3.56□□□□□ -1.84
RPB5YBR154C SEC3P33332 1336 aaKnown RBP3.55□□□□□ -1.84
RPB5YBR154C ASK1P35734 292 aa3.55□□□□□ -1.84
RPB5YBR154C HXT6P39003 570 aaKnown RBP3.55□□□□□ -1.84
RPB5YBR154C HXT7P39004 570 aa3.55□□□□□ -1.84
RPB5YBR154C BST1P43571 1029 aa3.55□□□□□ -1.84
RPB5YBR154C ALG12P53730 551 aa3.55□□□□□ -1.84
RPB5YBR154C ECM9Q02202 377 aa3.55□□□□□ -1.84
RPB5YBR154C USA1Q03714 838 aa3.55□□□□□ -1.84
RPB5YBR154C HFI1Q12060 488 aa3.55□□□□□ -1.84
RPB5YBR154C APM4Q99186 491 aa3.55□□□□□ -1.84
RPB5YBR154C BI2P03873 423 aa3.54□□□□□ -1.84
RPB5YBR154C MF(ALPHA)2P32435 120 aa3.54□□□□□ -1.84
RPB5YBR154C DID4P36108 232 aa3.54□□□□□ -1.84
RPB5YBR154C TYS1P36421 394 aaKnown RBP3.54□□□□□ -1.84
RPB5YBR154C EHT1P38295 451 aa3.54□□□□□ -1.84
RPB5YBR154C YJL193WP39542 402 aa3.54□□□□□ -1.84
RPB5YBR154C VID28P40547 921 aa3.54□□□□□ -1.84
RPB5YBR154C TDA10P42938 290 aa3.54□□□□□ -1.84
RPB5YBR154C SPN1Q06505 410 aaPredicted RBP3.54□□□□□ -1.84
RPB5YBR154C YTM1Q12024 460 aaPredicted RBP3.54□□□□□ -1.84
RPB5YBR154C CRC1Q12289 327 aa3.54□□□□□ -1.84
RPB5YBR154C ADR1P07248 1323 aa3.53□□□□□ -1.84
RPB5YBR154C HMG2P12684 1045 aa3.53□□□□□ -1.84
RPB5YBR154C YAP1P19880 650 aaKnown RBP3.53□□□□□ -1.84
RPB5YBR154C VPS33P20795 691 aa3.53□□□□□ -1.84
RPB5YBR154C MNN1P39106 762 aa3.53□□□□□ -1.84
RPB5YBR154C MNN11P46985 422 aaKnown RBP3.53□□□□□ -1.84
RPB5YBR154C MTQ2Q03920 221 aaPredicted RBP3.53□□□□□ -1.84
RPB5YBR154C MRPL1Q04599 285 aa3.53□□□□□ -1.84
RPB5YBR154C TPO3Q06451 622 aa3.53□□□□□ -1.84
RPB5YBR154C THI73Q07904 523 aa3.53□□□□□ -1.84
RPB5YBR154C AAC1P04710 309 aa3.52□□□□□ -1.85
RPB5YBR154C SEC12P11655 471 aa3.52□□□□□ -1.85
RPB5YBR154C DGR2P32330 852 aa3.52□□□□□ -1.85
RPB5YBR154C MTC7P32633 139 aa3.52□□□□□ -1.85
RPB5YBR154C RGT1P32862 1170 aa3.52□□□□□ -1.85
RPB5YBR154C YPT10P38146 199 aa3.52□□□□□ -1.85
RPB5YBR154C PMT3P47190 753 aa3.52□□□□□ -1.85
RPB5YBR154C RNH70P53331 553 aa3.52□□□□□ -1.85
RPB5YBR154C SQS1P53866 767 aaKnown RBP3.52□□□□□ -1.85
RPB5YBR154C YNL058CP53947 316 aa3.52□□□□□ -1.85
RPB5YBR154C YPL071CQ02864 156 aa3.52□□□□□ -1.85
RPB5YBR154C YLR111WQ12528 110 aa3.52□□□□□ -1.85
RPB5YBR154C YPR089WO13585 888 aa3.51□□□□□ -1.85
RPB5YBR154C CDC26P14724 124 aa3.51□□□□□ -1.85
RPB5YBR154C PXL1P36166 706 aa3.51□□□□□ -1.85
RPB5YBR154C YDL183CP48569 320 aa3.51□□□□□ -1.85
RPB5YBR154C LSC1P53598 329 aaKnown RBP3.51□□□□□ -1.85
RPB5YBR154C CRT10Q08226 957 aa3.51□□□□□ -1.85
RPB5YBR154C AHA1Q12449 350 aaKnown RBP3.51□□□□□ -1.85
RPB5YBR154C BET2P20133 325 aa3.5□□□□□ -1.85
RPB5YBR154C AEP2P22136 580 aa3.5□□□□□ -1.85
RPB5YBR154C FAT1P38225 669 aa3.5□□□□□ -1.85
RPB5YBR154C OAF1P39720 1047 aaPredicted RBP3.5□□□□□ -1.85
RPB5YBR154C SAE2P46946 345 aa3.5□□□□□ -1.85
RPB5YBR154C DNM1P54861 757 aa3.5□□□□□ -1.85
RPB5YBR154C NEW1Q08972 1196 aaKnown RBP3.5□□□□□ -1.85
RPB5YBR154C MGM1P32266 881 aa3.49□□□□□ -1.85
RPB5YBR154C YMR124WP39523 943 aaKnown RBP3.49□□□□□ -1.85
RPB5YBR154C CFD1P40558 293 aa3.49□□□□□ -1.85
RPB5YBR154C IRC7P43623 340 aa3.49□□□□□ -1.85
RPB5YBR154C RNR4P49723 345 aaKnown RBP3.49□□□□□ -1.85
RPB5YBR154C UME1Q03010 460 aa3.49□□□□□ -1.85
RPB5YBR154C NUP53Q03790 475 aa3.49□□□□□ -1.85
RPB5YBR154C NUP145P49687 1317 aa3.48□□□□□ -1.85
RPB5YBR154C RPS21AP0C0V8 87 aaKnown RBP3.48□□□□□ -1.85
RPB5YBR154C YMR085WP0CF18 432 aa3.48□□□□□ -1.85
RPB5YBR154C YPK1P12688 680 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms