RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	MSG5	P38590	489 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	BFA1	P47113	574 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	PIG1	Q06216	648 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	NDJ1	Q12366	352 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	RPO26	P20435	155 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	SAW1	P39735	261 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	YMR134W	P40207	237 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	IZH4	Q99393	312 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	RNA1	P11745	407 aa	Known RBP	13.92	□□□□□ -0.18
SSA1	YAL005C	HSP78	P33416	811 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	SAF1	P38352	637 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	TIF5	P38431	405 aa	Known RBP	13.92	□□□□□ -0.18
SSA1	YAL005C	PEX31	P53203	462 aa		13.92	□□□□□ -0.18
SSA1	YAL005C	UTP8	P53276	713 aa	Known RBP	13.92	□□□□□ -0.18
SSA1	YAL005C	PRP9	P19736	530 aa	Known RBP	13.91	□□□□□ -0.18
SSA1	YAL005C	SLY1	P22213	666 aa		13.91	□□□□□ -0.18
SSA1	YAL005C	SFB3	P38810	929 aa		13.91	□□□□□ -0.18
SSA1	YAL005C	YPQ1	Q12010	308 aa		13.91	□□□□□ -0.18
SSA1	YAL005C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	13.91	□□□□□ -0.18	not detected
SSA1	YAL005C	YIH1	P25637	258 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	GPI10	P30777	616 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	BTT1	P40314	149 aa	Predicted RBP	13.9	□□□□□ -0.18
SSA1	YAL005C	YNL320W	P42840	284 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	UTP6	Q02354	440 aa	Known RBP	13.9	□□□□□ -0.18
SSA1	YAL005C	ARA2	Q04212	335 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	PMT7	Q06644	662 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	NOP6	Q07623	225 aa	Known RBP	13.9	□□□□□ -0.18
SSA1	YAL005C	AAD4	Q07747	329 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	RRT5	P43607	289 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	SND1	Q04007	877 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	APL5	Q08951	932 aa	Known RBP	13.9	□□□□□ -0.18
SSA1	YAL005C	NUR1	Q12066	484 aa		13.9	□□□□□ -0.18
SSA1	YAL005C	BSP1	Q06604	576 aa		13.89	□□□□□ -0.19
SSA1	YAL005C	ACM1	Q08981	209 aa		13.89	□□□□□ -0.19
SSA1	YAL005C	ECM2	P38241	364 aa	Known RBP	13.88	□□□□□ -0.19
SSA1	YAL005C	SPE3	Q12074	293 aa	Known RBP	13.88	□□□□□ -0.19
SSA1	YAL005C	MET16	P18408	261 aa	Predicted RBP	13.88	□□□□□ -0.19
SSA1	YAL005C	VHC1	P38329	1120 aa		13.88	□□□□□ -0.19
SSA1	YAL005C	FSH1	P38777	243 aa	Known RBP	13.88	□□□□□ -0.19
SSA1	YAL005C	PEX28	P38848	579 aa		13.88	□□□□□ -0.19
SSA1	YAL005C	NUP60	P39705	539 aa		13.88	□□□□□ -0.19
SSA1	YAL005C	RSM26	P47141	266 aa		13.88	□□□□□ -0.19
SSA1	YAL005C	PIR3	Q03180	325 aa		13.88	□□□□□ -0.19
SSA1	YAL005C	FAP7	Q12055	197 aa	Predicted RBP	13.88	□□□□□ -0.19
SSA1	YAL005C	LPX1	Q12405	387 aa	Known RBP	13.88	□□□□□ -0.19
SSA1	YAL005C	CDC8	P00572	216 aa		13.87	□□□□□ -0.19
SSA1	YAL005C	HMG2	P12684	1045 aa		13.87	□□□□□ -0.19
SSA1	YAL005C	ISF1	P32488	338 aa		13.87	□□□□□ -0.19
SSA1	YAL005C	AIM26	P32858	118 aa		13.87	□□□□□ -0.19
SSA1	YAL005C	PRM9	P39551	298 aa		13.87	□□□□□ -0.19
SSA1	YAL005C	TPO1	Q07824	586 aa		13.87	□□□□□ -0.19
SSA1	YAL005C	APE1	P14904	514 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	ECM13	P38195	257 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	RIO1	Q12196	484 aa	Known RBP	13.86	□□□□□ -0.19
SSA1	YAL005C	PEX34	P25584	144 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	UBC6	P33296	250 aa	Predicted RBP	13.86	□□□□□ -0.19
SSA1	YAL005C	LAS1	P36146	502 aa	Predicted RBP	13.86	□□□□□ -0.19
SSA1	YAL005C	MIC19	P43594	170 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	RFX1	P48743	811 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	PSP1	P50896	841 aa	Known RBP	13.86	□□□□□ -0.19
SSA1	YAL005C	NMA111	P53920	997 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	SVS1	Q12254	260 aa		13.86	□□□□□ -0.19
SSA1	YAL005C	OLA1	P38219	394 aa	Known RBP	13.85	□□□□□ -0.19
SSA1	YAL005C	LAM1	P38851	1228 aa		13.85	□□□□□ -0.19
SSA1	YAL005C	AIM18	P38884	321 aa		13.85	□□□□□ -0.19
SSA1	YAL005C	MOB1	P40484	314 aa		13.85	□□□□□ -0.19
SSA1	YAL005C	GRX3	Q03835	250 aa		13.85	□□□□□ -0.19
SSA1	YAL005C	MTF1	P14908	341 aa	Known RBP	13.84	□□□□□ -0.19
SSA1	YAL005C	COQ8	P27697	501 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	RGD2	P43556	714 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	CNN1	P43618	361 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	ENO2	P00925	437 aa	Known RBP	13.84	□□□□□ -0.19
SSA1	YAL005C	URA8	P38627	578 aa	Predicted RBP	13.84	□□□□□ -0.19
SSA1	YAL005C	EDC3	P39998	551 aa	Known RBP	13.84	□□□□□ -0.19
SSA1	YAL005C	HLJ1	P48353	224 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	YGR127W	P53275	312 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	YDL073W	Q07454	984 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	YOR387C	Q08910	206 aa		13.84	□□□□□ -0.19
SSA1	YAL005C	CDC24	P11433	854 aa	Predicted RBP	13.83	□□□□□ -0.2
SSA1	YAL005C	POP4	P38336	279 aa		13.83	□□□□□ -0.2
SSA1	YAL005C	DIA4	P38705	446 aa	Predicted RBP	13.83	□□□□□ -0.2
SSA1	YAL005C	STL1	P39932	569 aa		13.83	□□□□□ -0.2
SSA1	YAL005C	SNG1	P46950	547 aa		13.83	□□□□□ -0.2
SSA1	YAL005C	GPM3	Q12326	303 aa		13.83	□□□□□ -0.2
SSA1	YAL005C	YML002W	P0CF17	737 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	PPH22	P23595	377 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	DUG2	P38149	878 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	BIT2	P38346	545 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	HOS4	P40480	1083 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	RTT101	P47050	842 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	COQ6	P53318	479 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	TRM112	P53738	135 aa	Predicted RBP	13.82	□□□□□ -0.2
SSA1	YAL005C	RPL22B	P56628	122 aa	Known RBP	13.82	□□□□□ -0.2
SSA1	YAL005C	RRD2	Q12461	358 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	CBF1	P17106	351 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	OYE3	P41816	400 aa	Predicted RBP	13.82	□□□□□ -0.2
SSA1	YAL005C	SGO1	Q08490	590 aa		13.82	□□□□□ -0.2
SSA1	YAL005C	HIS1	P00498	297 aa	Known RBP	13.81	□□□□□ -0.2
SSA1	YAL005C	GCR1	P07261	785 aa		13.81	□□□□□ -0.2
SSA1	YAL005C	GAL11	P19659	1081 aa		13.81	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms