RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TXNRD3Q86VQ6 643 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 IQCA1Q86XH1 822 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 TGFBRAP1Q8WUH2 860 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 CPLX3Q8WVH0 158 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 NRBP1Q9UHY1 535 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 NEDD4P46934 1319 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 SERPINC1P01008 464 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 INTS5Q6P9B9 1019 aaKnown RBP8.71□□□□□ -1.02
PKP4-217ENST00000628904 AMOTL1Q8IY63 956 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 SLC44A5Q8NCS7 719 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 ARHGEF1Q92888 912 aaKnown RBP8.71□□□□□ -1.02
PKP4-217ENST00000628904 SMARCC1Q92922 1105 aaPredicted RBP8.71□□□□□ -1.02
PKP4-217ENST00000628904 DSCC1Q9BVC3 393 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.02
PKP4-217ENST00000628904 SCAF8Q9UPN6 1271 aaKnown RBP8.71□□□□□ -1.02
PKP4-217ENST00000628904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.71□□□□□ -1.021e-6■■□□□ 11.4
PKP4-217ENST00000628904 NCAPD2Q15021 1401 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 SPTLC2O15270 562 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 ANKRD26Q9UPS8 1709 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 GOLGA6L6A8MZA4 724 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
PKP4-217ENST00000628904 NFIXQ14938 502 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 ZNF174Q15697 407 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 KRT40Q6A162 431 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 PGBD1Q96JS3 809 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 EP400Q96L91 3159 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 RGPD2P0DJD1 1756 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 SETD1AO15047 1707 aaKnown RBP8.7□□□□□ -1.02
PKP4-217ENST00000628904 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 CDC27P30260 824 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 GUCY1A2P33402 732 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 NLRP5P59047 1200 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 ZNF445P59923 1031 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 ZNF444Q8N0Y2 327 aaPredicted RBP8.7□□□□□ -1.02
PKP4-217ENST00000628904 RASGRP4Q8TDF6 673 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 NFAT5O94916 1531 aa8.7□□□□□ -1.02
PKP4-217ENST00000628904 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
PKP4-217ENST00000628904 NALCNQ8IZF0 1738 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 SLC3A2P08195 630 aaKnown RBP8.69□□□□□ -1.02
PKP4-217ENST00000628904 CACNB3P54284 484 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 GRAMD1CQ8IYS0 662 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CLIP2Q9UDT6 1046 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 UTYO14607 1347 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 OVOS2A0A0G2JMS6 1433 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CTCFLQ8NI51 663 aaPredicted RBP8.69□□□□□ -1.02
PKP4-217ENST00000628904 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.69□□□□□ -1.02
PKP4-217ENST00000628904 V9GYY5 206 aaPredicted RBP8.69□□□□□ -1.02
PKP4-217ENST00000628904 SPATA31A1Q5TZJ5 1347 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 SSBP05455 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
PKP4-217ENST00000628904 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CASP1P29466 404 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 GTF2IP78347 998 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CFAP100Q494V2 611 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 PARP10Q53GL7 1025 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 DIS3L2Q8IYB7 885 aaKnown RBP8.69□□□□□ -1.02
PKP4-217ENST00000628904 STRBPQ96SI9 672 aaKnown RBP8.69□□□□□ -1.02
PKP4-217ENST00000628904 MXD3Q9BW11 206 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 MINPP1Q9UNW1 487 aa8.69□□□□□ -1.02
PKP4-217ENST00000628904 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 PFKFB2O60825 505 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 CIAO1O76071 339 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 CAMTA2O94983 1202 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 CTDNEP1O95476 244 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 MCM7P33993 719 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 NDUFA8P51970 172 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 PPARAQ07869 468 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 AKNAD1Q5T1N1 836 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 APOA5Q6Q788 366 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 HEATR3Q7Z4Q2 680 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 ESR2Q92731 530 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.02
PKP4-217ENST00000628904 DHX58Q96C10 678 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 PCDHA7Q9UN72 937 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 UQCRHLA0A096LP55 91 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
PKP4-217ENST00000628904 CDKL5O76039 1030 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 UQCRHP07919 91 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 HSPA1LP34931 641 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 SYKP43405 635 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 ADGRA1Q86SQ6 560 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 ZHX3Q9H4I2 956 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 TNKSO95271 1327 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 APBA3O96018 575 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 LDHBP07195 334 aaKnown RBP8.68□□□□□ -1.02
PKP4-217ENST00000628904 TSPY3P0CV98 308 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 TSPY8P0CW00 308 aa8.68□□□□□ -1.02
PKP4-217ENST00000628904 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
PKP4-217ENST00000628904 AMIGO3Q86WK7 504 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms