RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IRS4O14654 1257 aaPredicted RBP13.05□□□□□ -0.32
VARS2-213ENST00000625423 GSDMDP57764 484 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 CCDC102BQ68D86 513 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 APOA5Q6Q788 366 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
VARS2-213ENST00000625423 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
VARS2-213ENST00000625423 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
VARS2-213ENST00000625423 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 CCAR2Q8N163 923 aaKnown RBP13.04□□□□□ -0.32
VARS2-213ENST00000625423 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
VARS2-213ENST00000625423 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
VARS2-213ENST00000625423 PDE8BO95263 885 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 PDE6AP16499 860 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 NCAPHQ15003 741 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 SYCP1Q15431 976 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 MYL10Q9BUA6 226 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 SOS2Q07890 1332 aaPredicted RBP13.04□□□□□ -0.32
VARS2-213ENST00000625423 CDKL5O76039 1030 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 SYKP43405 635 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 NFXL1Q6ZNB6 911 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
VARS2-213ENST00000625423 IMPACTQ9P2X3 320 aa13.04□□□□□ -0.32
VARS2-213ENST00000625423 SHANK3Q9BYB0 1731 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
VARS2-213ENST00000625423 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
VARS2-213ENST00000625423 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 IGDCC4Q8TDY8 1250 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 ATRNO75882 1429 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 TCRBV5S4A2TA0A5A2 114 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
VARS2-213ENST00000625423 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
VARS2-213ENST00000625423 UBE2Q2LH0YL09 131 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 ZBTB43O43298 467 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 TPM4P67936 248 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 ARMCX5Q6P1M9 558 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
VARS2-213ENST00000625423 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
VARS2-213ENST00000625423 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
VARS2-213ENST00000625423 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.32
VARS2-213ENST00000625423 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.32
VARS2-213ENST00000625423 PTPAQ15257 358 aa13.02□□□□□ -0.32
VARS2-213ENST00000625423 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.32
VARS2-213ENST00000625423 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.32
VARS2-213ENST00000625423 GOLGA8AA7E2F4 631 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.33
VARS2-213ENST00000625423 NTRK3Q16288 839 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 TMEM87BQ96K49 555 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 LY9Q9HBG7 655 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
VARS2-213ENST00000625423 C4AP0C0L4 1744 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 C4BP0C0L5 1744 aa13.02□□□□□ -0.33
VARS2-213ENST00000625423 PPP6R2O75170 966 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 HPSEQ9Y251 543 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 AKAP11Q9UKA4 1901 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 DDX60Q8IY21 1712 aaKnown RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 SNAP23O00161 211 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 PDE8AO60658 829 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 PNOCQ13519 176 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 E4F1Q66K89 784 aaPredicted RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 EPB41L4AQ9HCS5 686 aaPredicted RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 KCND1Q9NSA2 647 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 ZNF215Q9UL58 517 aaPredicted RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
VARS2-213ENST00000625423 FANCCQ00597 558 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 TRIM29Q14134 588 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 CCDC150Q8NCX0 1101 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.336e-8■■■■□ 19.5
VARS2-213ENST00000625423 TUBE1Q9UJT0 475 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
VARS2-213ENST00000625423 UBN2Q6ZU65 1347 aa13.01□□□□□ -0.33
VARS2-213ENST00000625423 PUM3Q15397 648 aaKnown RBP13□□□□□ -0.33
VARS2-213ENST00000625423 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
VARS2-213ENST00000625423 KIF18AQ8NI77 898 aa13□□□□□ -0.33
VARS2-213ENST00000625423 LPIN2Q92539 896 aa13□□□□□ -0.33
VARS2-213ENST00000625423 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
VARS2-213ENST00000625423 HSD3B7Q9H2F3 369 aa13□□□□□ -0.33
VARS2-213ENST00000625423 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
VARS2-213ENST00000625423 MYH7P12883 1935 aa13□□□□□ -0.33
VARS2-213ENST00000625423 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
VARS2-213ENST00000625423 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
VARS2-213ENST00000625423 IKBKBO14920 756 aa13□□□□□ -0.33
VARS2-213ENST00000625423 SGMS1Q86VZ5 419 aa13□□□□□ -0.33
VARS2-213ENST00000625423 IFNL3Q8IZI9 196 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms