RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	ADAM23	O75077	832 aa		10.35	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	TNNI2	P48788	182 aa		10.35	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	FAM160A1	Q05DH4	1040 aa		10.35	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	FBXL19	Q6PCT2	694 aa		10.35	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	TRIM42	Q8IWZ5	723 aa		10.35	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	NOP53	Q9NZM5	478 aa	Known RBP	10.35	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	MAP1S	Q66K74	1059 aa	Predicted RBP	10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	KIAA0825	Q8IV33	1275 aa		10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	KCNB2	Q92953	911 aa		10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	GAL3ST3	Q96A11	431 aa		10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	TINF2	Q9BSI4	451 aa		10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	SPON2	Q9BUD6	331 aa		10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	CCDC86	Q9H6F5	360 aa	Known RBP	10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	CACNA2D2	Q9NY47	1150 aa		10.34	□□□□□ -0.75
SOX2-OT-231	ENST00000599082	TRIM37	O94972	964 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	DLGAP3	O95886	979 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	ELN	P15502	786 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	LMNB1	P20700	586 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SEPT6	Q14141	434 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	NAALADL2	Q58DX5	795 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SCARA3	Q6AZY7	606 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GOLM1	Q8NBJ4	401 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	UBASH3B	Q8TF42	649 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	MIR1-1HG	Q9H1L0	117 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	CAPN10	Q9HC96	672 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	KRT82	Q9NSB4	513 aa		10.33	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GREM1	O60565	184 aa		10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	WISP1	O95388	367 aa		10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	PTPN11	Q06124	597 aa	Predicted RBP	10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	PAK2	Q13177	524 aa		10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	PRRT3	Q5FWE3	981 aa		10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SNAP47	Q5SQN1	464 aa		10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	CCDC84	Q86UT8	332 aa	Predicted RBP	10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.32	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	ZNF862	O60290	1169 aa		10.31	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	DUOXA2	Q1HG44	320 aa		10.31	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	IGF2-AS	Q6U949	168 aa		10.31	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GPBAR1	Q8TDU6	330 aa		10.31	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	EAF1	Q96JC9	268 aa	Predicted RBP	10.31	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	INPP5F	Q9Y2H2	1132 aa		10.31	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	MSTN	O14793	375 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	F13A1	P00488	732 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	COL8A1	P27658	744 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GJA8	P48165	433 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	PDE3A	Q14432	1141 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GRIK4	Q16099	956 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	PLA2G4E	Q3MJ16	856 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	JARID2	Q92833	1246 aa	Predicted RBP	10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	KRTAP4-8	Q9BYQ9	185 aa		10.3	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	FAM221A	A4D161	298 aa		10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	LIG1	P18858	919 aa		10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	FAM196A	Q6ZSG2	479 aa		10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	KIAA1211	Q6ZU35	1233 aa		10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GATAD2B	Q8WXI9	593 aa		10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	WDR89	Q96FK6	387 aa	Predicted RBP	10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	NT5C1A	Q9BXI3	368 aa		10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	MRPL18	Q9H0U6	180 aa	Known RBP	10.29	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SPATA31C1	P0DKV0	1188 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SHISA2	Q6UWI4	295 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	ACAD11	Q709F0	780 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SLC43A3	Q8NBI5	491 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	GPRASP2	Q96D09	838 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SPOCK3	Q9BQ16	436 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	UBP1	Q9NZI7	540 aa		10.28	□□□□□ -0.76
SOX2-OT-231	ENST00000599082	SELP	P16109	830 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	CRK	P46108	304 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	KIF4B	Q2VIQ3	1234 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	EXOSC6	Q5RKV6	272 aa	Known RBP	10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	FBXO27	Q8NI29	283 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	RASGRP4	Q8TDF6	673 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ACSBG1	Q96GR2	724 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	WDR18	Q9BV38	432 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	TMPRSS13	Q9BYE2	586 aa		10.27	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	CILP	O75339	1184 aa		10.26	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ITGB2	P05107	769 aa		10.26	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	GNL2	Q13823	731 aa	Known RBP	10.26	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	RUSC1	Q9BVN2	902 aa		10.26	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	PCDHA4	Q9UN74	947 aa		10.26	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	ROBO2	Q9HCK4	1378 aa		10.26	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	MEGF11	A6BM72	1044 aa		10.25	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	AOC2	O75106	756 aa		10.25	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	LENG1	Q96BZ8	264 aa	Predicted RBP	10.25	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	DCAF5	Q96JK2	942 aa		10.25	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	LRRC3	Q9BY71	257 aa		10.25	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	RNF208	Q9H0X6	261 aa		10.25	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	TLR3	O15455	904 aa	Known RBP	10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	CDK8	P49336	464 aa		10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	RPL6	Q02878	288 aa	Known RBP	10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	APOBR	Q0VD83	1088 aa		10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	MPP2	Q14168	576 aa		10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	TMEM130	Q8N3G9	435 aa		10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	PCDHGC5	Q9Y5F6	944 aa		10.24	□□□□□ -0.77
SOX2-OT-231	ENST00000599082		F8W735	103 aa	Predicted RBP	10.23	□□□□□ -0.77
SOX2-OT-231	ENST00000599082	PROC	P04070	461 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms