RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-231ENST00000599082 AEBP2Q6ZN18 517 aaPredicted RBP32.37■■■□□ 2.77
SOX2-OT-231ENST00000599082 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
SOX2-OT-231ENST00000599082 SENP3Q9H4L4 574 aaPredicted RBP27.68■■■□□ 2.02
SOX2-OT-231ENST00000599082 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
SOX2-OT-231ENST00000599082 FOXD1Q16676 465 aa25.87■■□□□ 1.73
SOX2-OT-231ENST00000599082 POTEDQ86YR6 584 aa24.77■■□□□ 1.56
SOX2-OT-231ENST00000599082 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
SOX2-OT-231ENST00000599082 MSH5O43196 834 aa24.41■■□□□ 1.5
SOX2-OT-231ENST00000599082 PIAS4Q8N2W9 510 aaPredicted RBP24.05■■□□□ 1.44
SOX2-OT-231ENST00000599082 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
SOX2-OT-231ENST00000599082 ADRA2BP18089 450 aa23.65■■□□□ 1.38
SOX2-OT-231ENST00000599082 MAPK8IP2Q13387 824 aaPredicted RBP21.89■■□□□ 1.09
SOX2-OT-231ENST00000599082 KCNA4P22459 653 aa21.88■■□□□ 1.09
SOX2-OT-231ENST00000599082 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
SOX2-OT-231ENST00000599082 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
SOX2-OT-231ENST00000599082 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
SOX2-OT-231ENST00000599082 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
SOX2-OT-231ENST00000599082 CACNB1Q02641 598 aaPredicted RBP21.27■■□□□ 1
SOX2-OT-231ENST00000599082 CNKSR2Q8WXI2 1034 aa21.16■□□□□ 0.98
SOX2-OT-231ENST00000599082 NPM3O75607 178 aaKnown RBP21.12■□□□□ 0.97
SOX2-OT-231ENST00000599082 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
SOX2-OT-231ENST00000599082 SLC4A1APQ9BWU0 796 aaKnown RBP20.88■□□□□ 0.93
SOX2-OT-231ENST00000599082 HOXD11P31277 338 aaPredicted RBP20.85■□□□□ 0.93
SOX2-OT-231ENST00000599082 RNF39Q9H2S5 420 aa20.79■□□□□ 0.92
SOX2-OT-231ENST00000599082 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
SOX2-OT-231ENST00000599082 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
SOX2-OT-231ENST00000599082 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
SOX2-OT-231ENST00000599082 C1QBPQ07021 282 aaKnown RBP20.44■□□□□ 0.86
SOX2-OT-231ENST00000599082 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
SOX2-OT-231ENST00000599082 ZBTB22O15209 634 aa20.16■□□□□ 0.82
SOX2-OT-231ENST00000599082 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
SOX2-OT-231ENST00000599082 SLC4A2P04920 1241 aa19.86■□□□□ 0.77
SOX2-OT-231ENST00000599082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
SOX2-OT-231ENST00000599082 MYCNP04198 464 aaPredicted RBP19.49■□□□□ 0.71
SOX2-OT-231ENST00000599082 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
SOX2-OT-231ENST00000599082 POTEHQ6S545 545 aa19.29■□□□□ 0.68
SOX2-OT-231ENST00000599082 DSG3P32926 999 aa19.28■□□□□ 0.68
SOX2-OT-231ENST00000599082 SPINK5Q9NQ38 1064 aaPredicted RBP19.28■□□□□ 0.68
SOX2-OT-231ENST00000599082 CAPN15O75808 1086 aa19.25■□□□□ 0.67
SOX2-OT-231ENST00000599082 ATXN8OSP0DMR3 200 aa19.25■□□□□ 0.67
SOX2-OT-231ENST00000599082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.09■□□□□ 0.65
SOX2-OT-231ENST00000599082 HNRNPUL2Q1KMD3 747 aaKnown RBP19.09■□□□□ 0.65
SOX2-OT-231ENST00000599082 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
SOX2-OT-231ENST00000599082 ATF5Q9Y2D1 282 aaPredicted RBP18.98■□□□□ 0.63
SOX2-OT-231ENST00000599082 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
SOX2-OT-231ENST00000599082 ABCB7O75027 752 aa18.78■□□□□ 0.6
SOX2-OT-231ENST00000599082 APLP2Q06481 763 aa18.77■□□□□ 0.6
SOX2-OT-231ENST00000599082 ZNF219Q9P2Y4 722 aaPredicted RBP18.77■□□□□ 0.6
SOX2-OT-231ENST00000599082 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
SOX2-OT-231ENST00000599082 FKBP8Q14318 412 aa18.37■□□□□ 0.53
SOX2-OT-231ENST00000599082 POLA2Q14181 598 aa18.28■□□□□ 0.52
SOX2-OT-231ENST00000599082 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
SOX2-OT-231ENST00000599082 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
SOX2-OT-231ENST00000599082 FBLN2P98095 1184 aa18.09■□□□□ 0.49
SOX2-OT-231ENST00000599082 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
SOX2-OT-231ENST00000599082 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
SOX2-OT-231ENST00000599082 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
SOX2-OT-231ENST00000599082 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
SOX2-OT-231ENST00000599082 PROM2Q8N271 834 aa17.73■□□□□ 0.43
SOX2-OT-231ENST00000599082 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
SOX2-OT-231ENST00000599082 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
SOX2-OT-231ENST00000599082 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
SOX2-OT-231ENST00000599082 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
SOX2-OT-231ENST00000599082 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
SOX2-OT-231ENST00000599082 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
SOX2-OT-231ENST00000599082 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
SOX2-OT-231ENST00000599082 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
SOX2-OT-231ENST00000599082 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
SOX2-OT-231ENST00000599082 HAX1O00165 279 aa17.49■□□□□ 0.39
SOX2-OT-231ENST00000599082 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
SOX2-OT-231ENST00000599082 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-231ENST00000599082 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
SOX2-OT-231ENST00000599082 SSUH2Q9Y2M2 353 aa17.48■□□□□ 0.39
SOX2-OT-231ENST00000599082 VASPP50552 380 aaPredicted RBP17.35■□□□□ 0.37
SOX2-OT-231ENST00000599082 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
SOX2-OT-231ENST00000599082 EVX2Q03828 476 aa17.25■□□□□ 0.35
SOX2-OT-231ENST00000599082 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
SOX2-OT-231ENST00000599082 IFNLR1Q8IU57 520 aaPredicted RBP17.16■□□□□ 0.34
SOX2-OT-231ENST00000599082 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
SOX2-OT-231ENST00000599082 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
SOX2-OT-231ENST00000599082 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
SOX2-OT-231ENST00000599082 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
SOX2-OT-231ENST00000599082 MIER1Q8N108 512 aa16.95■□□□□ 0.3
SOX2-OT-231ENST00000599082 C19orf67A6NJJ6 358 aa16.94■□□□□ 0.3
SOX2-OT-231ENST00000599082 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
SOX2-OT-231ENST00000599082 SPOCK2Q92563 424 aa16.86■□□□□ 0.29
SOX2-OT-231ENST00000599082 GABBR2O75899 941 aa16.82■□□□□ 0.28
SOX2-OT-231ENST00000599082 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
SOX2-OT-231ENST00000599082 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
SOX2-OT-231ENST00000599082 PKD2Q13563 968 aa16.76■□□□□ 0.27
SOX2-OT-231ENST00000599082 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
SOX2-OT-231ENST00000599082 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-231ENST00000599082 LHX8Q68G74 356 aa16.71■□□□□ 0.27
SOX2-OT-231ENST00000599082 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
SOX2-OT-231ENST00000599082 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-231ENST00000599082 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-231ENST00000599082 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
SOX2-OT-231ENST00000599082 NUBP1P53384 320 aa16.51■□□□□ 0.23
SOX2-OT-231ENST00000599082 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
SOX2-OT-231ENST00000599082 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms