RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 RCAN1P53805 252 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 NTRK3Q16288 839 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 ANO1Q5XXA6 986 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 BARGINQ6ZT62 677 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 C11orf57Q6ZUT1 292 aaPredicted RBP26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 MAGEB6Q8N7X4 407 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 SPC24Q8NBT2 197 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 NAPBQ9H115 298 aa26.73■■□□□ 1.87
SPTBN4-209ENST00000596411 B4E1Z4 1266 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 MBD4O95243 580 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 OTUD7BQ6GQQ9 843 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 SYNE3Q6ZMZ3 975 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 MPNDQ8N594 471 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 MYRIPQ8NFW9 859 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 HELBQ8NG08 1087 aaPredicted RBP26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 SMARCC1Q92922 1105 aaPredicted RBP26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 BPIFA3Q9BQP9 254 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 KIF28PB7ZC32 967 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 ZBTB43O43298 467 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 ITPK1Q13572 414 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 STAG1Q8WVM7 1258 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 CDC5LQ99459 802 aaKnown RBP26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 ALG1Q9BT22 464 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 DENND2AQ9ULE3 1009 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 SPATA31A5Q5VU36 1347 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 SPATA31A7Q8IWB4 1347 aa26.72■■□□□ 1.87
SPTBN4-209ENST00000596411 CMA1P23946 247 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 SLC39A14Q15043 492 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 SF3A1Q15459 793 aaKnown RBP26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 AKNAD1Q5T1N1 836 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 CLEC4GQ6UXB4 293 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 CEP57L1Q8IYX8 460 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 MARCH10Q8NA82 808 aaPredicted RBP26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 NAT10Q9H0A0 1025 aaKnown RBP26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 SEC31BQ9NQW1 1179 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 PYCARDQ9ULZ3 195 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 ZNF652Q9Y2D9 606 aa26.71■■□□□ 1.87
SPTBN4-209ENST00000596411 ZNF804BA4D1E1 1349 aa26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 GSG1L2A8MUP6 293 aa26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 PPFIA3O75145 1194 aa26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 PPP6R2O75170 966 aa26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 GTF2F1P35269 517 aaKnown RBP eCLIP26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 AXDND1Q5T1B0 1012 aaPredicted RBP26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 TIGD1Q96MW7 591 aa26.7■■□□□ 1.87
SPTBN4-209ENST00000596411 FAM237AA0A1B0GTK4 181 aa26.7■■□□□ 1.86
SPTBN4-209ENST00000596411 PTGS1P23219 599 aa26.7■■□□□ 1.86
SPTBN4-209ENST00000596411 NKX2-3Q8TAU0 364 aa26.7■■□□□ 1.86
SPTBN4-209ENST00000596411 NACAP1Q9BZK3 213 aa26.7■■□□□ 1.86
SPTBN4-209ENST00000596411 POLR3DP05423 398 aaPredicted RBP26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 U2AF2P26368 475 aaKnown RBP eCLIP26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 CDC27P30260 824 aa26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 NDUFA8P51970 172 aa26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 HSP90AA2PQ14568 343 aaPredicted RBP26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 TMEM67Q5HYA8 995 aa26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 DHX40Q8IX18 779 aaKnown RBP26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 FAM217BQ9NTX9 383 aaPredicted RBP26.69■■□□□ 1.86
SPTBN4-209ENST00000596411 GOLGA8AA7E2F4 631 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 KRT40Q6A162 431 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 CCDC186Q7Z3E2 898 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 MAP7D2Q96T17 732 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 KIAA1468Q9P260 1216 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 NIP7Q9Y221 180 aaKnown RBP eCLIP26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 DNTTIP2Q5QJE6 756 aaKnown RBP26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 VPS37DQ86XT2 251 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 JMYQ8N9B5 988 aa26.68■■□□□ 1.86
SPTBN4-209ENST00000596411 NEMFO60524 1076 aa26.67■■□□□ 1.86
SPTBN4-209ENST00000596411 IARSP41252 1262 aaKnown RBP26.67■■□□□ 1.86
SPTBN4-209ENST00000596411 CHRNDQ07001 517 aa26.67■■□□□ 1.86
SPTBN4-209ENST00000596411 WASF1Q92558 559 aa26.67■■□□□ 1.86
SPTBN4-209ENST00000596411 CLIP2Q9UDT6 1046 aa26.67■■□□□ 1.86
SPTBN4-209ENST00000596411 A0A1B0GVL5 298 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 IFNAR1P17181 557 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 RBM6P78332 1123 aaKnown RBP26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 RAB11FIP4Q86YS3 637 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 SDF4Q9BRK5 362 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 ARMT1Q9H993 441 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 ZSWIM5Q9P217 1185 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 SCN7AQ01118 1682 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 BECN2A8MW95 431 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 FMNL1O95466 1100 aaPredicted RBP26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 MFSD6Q6ZSS7 791 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 TMTC2Q8N394 836 aa26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 RNF41Q9H4P4 317 aaPredicted RBP26.66■■□□□ 1.86
SPTBN4-209ENST00000596411 RANBP6O60518 1105 aaKnown RBP26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 SF3B3Q15393 1217 aaKnown RBP26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 NFXL1Q6ZNB6 911 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 MICU3Q86XE3 530 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 SENP2Q9HC62 589 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 ANAPC4Q9UJX5 808 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 HPSEQ9Y251 543 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 SLC12A7Q9Y666 1083 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 CASZ1Q86V15 1759 aa26.65■■□□□ 1.86
SPTBN4-209ENST00000596411 LTBP4Q8N2S1 1624 aa26.64■■□□□ 1.86
SPTBN4-209ENST00000596411 IFIT3O14879 490 aaKnown RBP26.64■■□□□ 1.86
SPTBN4-209ENST00000596411 BCAMP50895 628 aa26.64■■□□□ 1.86
SPTBN4-209ENST00000596411 PTPAQ15257 358 aa26.64■■□□□ 1.86
SPTBN4-209ENST00000596411 MTERF4Q7Z6M4 381 aaKnown RBP26.64■■□□□ 1.86
SPTBN4-209ENST00000596411 DRC7Q8IY82 874 aa26.64■■□□□ 1.86
SPTBN4-209ENST00000596411 PDCL3Q9H2J4 239 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms