RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
NF1-223ENST00000584328 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
NF1-223ENST00000584328 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
NF1-223ENST00000584328 STOML1Q9UBI4 398 aa8.27□□□□□ -1.09
NF1-223ENST00000584328 ERCC6L2Q5T890 1561 aa8.27□□□□□ -1.09
NF1-223ENST00000584328 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 DISP1Q96F81 1524 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
NF1-223ENST00000584328 CTSBP07858 339 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 BMP3P12645 472 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 FSTP19883 344 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 ATP2B2Q01814 1243 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 FAAP100Q0VG06 881 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 CORO1BQ9BR76 489 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 SUGCTQ9HAC7 445 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 ZFYVE1Q9HBF4 777 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
NF1-223ENST00000584328 RIMBP3CA6NJZ7 1639 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 RIMBP3BA6NNM3 1639 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 RIMBP3Q9UFD9 1639 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 ECEL1O95672 775 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
NF1-223ENST00000584328 XRCC5P13010 732 aaKnown RBP8.25□□□□□ -1.09
NF1-223ENST00000584328 ALG1LQ6GMV1 187 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 KCNF1Q9H3M0 494 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 ARAP1Q96P48 1450 aa8.25□□□□□ -1.09
NF1-223ENST00000584328 PRG4Q92954 1404 aaPredicted RBP8.24□□□□□ -1.09
NF1-223ENST00000584328 TIAF1O95411 115 aa8.24□□□□□ -1.09
NF1-223ENST00000584328 DRD2P14416 443 aa8.24□□□□□ -1.09
NF1-223ENST00000584328 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
NF1-223ENST00000584328 HP1BP3Q5SSJ5 553 aaPredicted RBP8.24□□□□□ -1.09
NF1-223ENST00000584328 FAM9AQ8IZU1 332 aaPredicted RBP8.24□□□□□ -1.09
NF1-223ENST00000584328 GPN3Q9UHW5 284 aaPredicted RBP8.24□□□□□ -1.09
NF1-223ENST00000584328 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
NF1-223ENST00000584328 BEND4Q6ZU67 534 aa8.23□□□□□ -1.09
NF1-223ENST00000584328 CLEC10AQ8IUN9 316 aa8.23□□□□□ -1.09
NF1-223ENST00000584328 TRIM42Q8IWZ5 723 aa8.23□□□□□ -1.09
NF1-223ENST00000584328 C7orf69Q9H7B7 122 aa8.23□□□□□ -1.09
NF1-223ENST00000584328 CTTNBP2Q8WZ74 1663 aa8.23□□□□□ -1.09
NF1-223ENST00000584328 HMX2A2RU54 273 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
NF1-223ENST00000584328 PPP2R3AQ06190 1150 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 SOX4Q06945 474 aaPredicted RBP8.22□□□□□ -1.09
NF1-223ENST00000584328 SGO2Q562F6 1265 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 SLC51AQ86UW1 340 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 FAM83CQ9BQN1 747 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 OSBPL7Q9BZF2 842 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 RAD18Q9NS91 495 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 TMEM39AQ9NV64 488 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 SAMD9Q5K651 1589 aa8.22□□□□□ -1.09
NF1-223ENST00000584328 KIAA0556O60303 1618 aa8.21□□□□□ -1.09
NF1-223ENST00000584328 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 ANKRD33BA6NCL7 494 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 GSC2O15499 205 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 IGLV1-40P01703 118 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 ADH5P11766 374 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 MAP4P27816 1152 aaKnown RBP8.21□□□□□ -1.1
NF1-223ENST00000584328 USP11P51784 963 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 PDE3AQ14432 1141 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 AKAP4Q5JQC9 854 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 Q8N3U1 123 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 C2CD4AQ8NCU7 369 aaPredicted RBP8.21□□□□□ -1.1
NF1-223ENST00000584328 SRCIN1Q9C0H9 1055 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 SPG7Q9UQ90 795 aa8.21□□□□□ -1.1
NF1-223ENST00000584328 GIPC1O14908 333 aa8.2□□□□□ -1.1
NF1-223ENST00000584328 RXRBP28702 533 aa8.2□□□□□ -1.1
NF1-223ENST00000584328 GSTT1P30711 240 aa8.2□□□□□ -1.1
NF1-223ENST00000584328 NFIAQ12857 509 aa8.2□□□□□ -1.1
NF1-223ENST00000584328 C3orf58Q8NDZ4 430 aa8.2□□□□□ -1.1
NF1-223ENST00000584328 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
NF1-223ENST00000584328 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
NF1-223ENST00000584328 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
NF1-223ENST00000584328 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
NF1-223ENST00000584328 CARMIL2Q6F5E8 1435 aa8.19□□□□□ -1.1
NF1-223ENST00000584328 EFCAB5A4FU69 1503 aa8.19□□□□□ -1.1
NF1-223ENST00000584328 AOC2O75106 756 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 GSTP1P09211 210 aaKnown RBP8.18□□□□□ -1.1
NF1-223ENST00000584328 CDPF1Q6NVV7 123 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 DYMQ7RTS9 669 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 FBLIM1Q8WUP2 373 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 CCDC86Q9H6F5 360 aaKnown RBP8.18□□□□□ -1.1
NF1-223ENST00000584328 C12orf49Q9H741 205 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 AP4E1Q9UPM8 1137 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 ACTL7BQ9Y614 415 aa8.18□□□□□ -1.1
NF1-223ENST00000584328 LIG1P18858 919 aa8.17□□□□□ -1.1
NF1-223ENST00000584328 COL19A1Q14993 1142 aa8.17□□□□□ -1.1
NF1-223ENST00000584328 EAPPQ56P03 285 aaPredicted RBP8.17□□□□□ -1.1
NF1-223ENST00000584328 SULF2Q8IWU5 870 aa8.17□□□□□ -1.1
NF1-223ENST00000584328 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
NF1-223ENST00000584328 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
NF1-223ENST00000584328 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
NF1-223ENST00000584328 UHRF1BP1LA0JNW5 1464 aa8.16□□□□□ -1.1
NF1-223ENST00000584328 PRPF40AO75400 957 aaKnown RBP8.16□□□□□ -1.1
NF1-223ENST00000584328 NFKBIBQ15653 356 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms