RNA–Protein interactions for RNA: ENST00000571378.5

SRRM2-208, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,870 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-208ENST00000571378 NAPBQ9H115 298 aa17.09■□□□□ 0.33
SRRM2-208ENST00000571378 KCNF1Q9H3M0 494 aa17.09■□□□□ 0.33
SRRM2-208ENST00000571378 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 DYNC1I1O14576 645 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 MAGEB6Q8N7X4 407 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 NACAP1Q9BZK3 213 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 NAT10Q9H0A0 1025 aaKnown RBP17.08■□□□□ 0.33
SRRM2-208ENST00000571378 LY9Q9HBG7 655 aa17.08■□□□□ 0.33
SRRM2-208ENST00000571378 SPTLC2O15270 562 aa17.08■□□□□ 0.32
SRRM2-208ENST00000571378 ZBTB43O43298 467 aa17.08■□□□□ 0.32
SRRM2-208ENST00000571378 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
SRRM2-208ENST00000571378 ZNF830Q96NB3 372 aaPredicted RBP17.08■□□□□ 0.32
SRRM2-208ENST00000571378 BPIFA3Q9BQP9 254 aa17.08■□□□□ 0.32
SRRM2-208ENST00000571378 NEDD4P46934 1319 aa17.08■□□□□ 0.32
SRRM2-208ENST00000571378 MBD4O95243 580 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 ANO1Q5XXA6 986 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 MRFAP1L1Q96HT8 127 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 EPB41L4AQ9HCS5 686 aaPredicted RBP17.07■□□□□ 0.32
SRRM2-208ENST00000571378 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 MARCH10Q8NA82 808 aaPredicted RBP17.07■□□□□ 0.32
SRRM2-208ENST00000571378 WASF1Q92558 559 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 ALG1Q9BT22 464 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 B4E1Z4 1266 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 UQCRHP07919 91 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 ITPK1Q13572 414 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 CEP57L1Q8IYX8 460 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
SRRM2-208ENST00000571378 PPP6R2O75170 966 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 TMEM67Q5HYA8 995 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
SRRM2-208ENST00000571378 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 NIP7Q9Y221 180 aaKnown RBP eCLIP17.06■□□□□ 0.32
SRRM2-208ENST00000571378 MAST2Q6P0Q8 1798 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 CMA1P23946 247 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 SEC31BQ9NQW1 1179 aa17.06■□□□□ 0.32
SRRM2-208ENST00000571378 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 SLC39A14Q15043 492 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 NTRK3Q16288 839 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 C11orf57Q6ZUT1 292 aaPredicted RBP17.05■□□□□ 0.32
SRRM2-208ENST00000571378 SPC24Q8NBT2 197 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
SRRM2-208ENST00000571378 KIF28PB7ZC32 967 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 NEMFO60524 1076 aa17.05■□□□□ 0.32
SRRM2-208ENST00000571378 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
SRRM2-208ENST00000571378 TRIM29Q14134 588 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
SRRM2-208ENST00000571378 OTUD7BQ6GQQ9 843 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 TMTC2Q8N394 836 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 MYRIPQ8NFW9 859 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
SRRM2-208ENST00000571378 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.322e-16■■■■□ 22
SRRM2-208ENST00000571378 CHRNDQ07001 517 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 CACNA1SQ13698 1873 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 DNTTIP2Q5QJE6 756 aaKnown RBP17.04■□□□□ 0.32
SRRM2-208ENST00000571378 MAP7D2Q96T17 732 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 ARMT1Q9H993 441 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
SRRM2-208ENST00000571378 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
SRRM2-208ENST00000571378 CDC27P30260 824 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 NDUFA8P51970 172 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 RBM6P78332 1123 aaKnown RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 SF3B3Q15393 1217 aaKnown RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 KRT40Q6A162 431 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 DHX40Q8IX18 779 aaKnown RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 IFNAR1P17181 557 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 PTGS1P23219 599 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 DRC7Q8IY82 874 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 KIAA1468Q9P260 1216 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 PYCARDQ9ULZ3 195 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 LAMB1P07942 1786 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 BECN2A8MW95 431 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 IFIT3O14879 490 aaKnown RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 GTF2F1P35269 517 aaKnown RBP eCLIP17.03■□□□□ 0.323e-43■■■■■ 27.4
SRRM2-208ENST00000571378 SSRP1Q08945 709 aaKnown RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 UBE4AQ14139 1066 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 FAM217BQ9NTX9 383 aaPredicted RBP17.03■□□□□ 0.32
SRRM2-208ENST00000571378 ZSWIM5Q9P217 1185 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
SRRM2-208ENST00000571378 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms