RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 NECAB1Q8N987 351 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 GTF3C6Q969F1 213 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 CHMP4CQ96CF2 233 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 GBP4Q96PP9 640 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 CNNM2Q9H8M5 875 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 ATP8A2Q9NTI2 1148 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 SMC3Q9UQE7 1217 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
CDH13-205ENST00000562307 FGRP09769 529 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 CHRNA5P30532 468 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 TDO2P48775 406 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
CDH13-205ENST00000562307 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 CRNKL1Q9BZJ0 848 aaKnown RBP11.25□□□□□ -0.61
CDH13-205ENST00000562307 KRT23Q9C075 422 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 TIAM2Q8IVF5 1701 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 LAMA4Q16363 1823 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 MYH13Q9UKX3 1938 aa11.25□□□□□ -0.61
CDH13-205ENST00000562307 GPR75-ASB3A0A0A6YYF3 556 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 BAG3O95817 575 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 GJB2P29033 226 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 PDIA3P30101 505 aaKnown RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 FGD1P98174 961 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 PPARAQ07869 468 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 APOBRQ0VD83 1088 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 CTR9Q6PD62 1173 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 CYB5R4Q7L1T6 521 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 PODNQ7Z5L7 613 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 SDR42E1Q8WUS8 393 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 TMEM87BQ96K49 555 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 AATFQ9NY61 560 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDH13-205ENST00000562307 MKRN1Q9UHC7 482 aaKnown RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 JAG2Q9Y219 1238 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 MROH7-TTC4A0A0A0MT08 1334 aa11.24□□□□□ -0.61
CDH13-205ENST00000562307 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
CDH13-205ENST00000562307 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
CDH13-205ENST00000562307 SYT1P21579 422 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 KCNA3P22001 575 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 LIFRP42702 1097 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
CDH13-205ENST00000562307 GTF2IP78347 998 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 SCRN1Q12765 414 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 SMARCC2Q8TAQ2 1214 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 ZSWIM5Q9P217 1185 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 GAKO14976 1311 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 NEDD4P46934 1319 aa11.23□□□□□ -0.61
CDH13-205ENST00000562307 B4E1Z4 1266 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 STX6O43752 255 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 PDCP20941 246 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 PTMSP20962 102 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 NT5C2P49902 561 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 CCDC88AQ3V6T2 1871 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 SLX4Q8IY92 1834 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 INCENPQ9NQS7 918 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
CDH13-205ENST00000562307 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
CDH13-205ENST00000562307 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
CDH13-205ENST00000562307 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 USP17L21D6R901 530 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 ORC4O43929 436 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 ZSCAN22P10073 491 aaPredicted RBP11.21□□□□□ -0.61
CDH13-205ENST00000562307 PLCG2P16885 1265 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 TGFB2P61812 414 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 STK3Q13188 491 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 CERS5Q8N5B7 392 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 TTLL6Q8N841 843 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
CDH13-205ENST00000562307 SH3RF3Q8TEJ3 882 aaPredicted RBP11.21□□□□□ -0.61
CDH13-205ENST00000562307 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
CDH13-205ENST00000562307 MTFR1LQ9H019 292 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.61
CDH13-205ENST00000562307 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
CDH13-205ENST00000562307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms