RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 FBXO18Q8NFZ0 1043 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 C8orf76Q96K31 380 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
GPHN-213ENST00000556501 SLC24A3Q9HC58 644 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 ORC3Q9UBD5 711 aaPredicted RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 WWC3Q9ULE0 1092 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 CLEC11AQ9Y240 323 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 THRAP3Q9Y2W1 955 aaKnown RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
GPHN-213ENST00000556501 MYH13Q9UKX3 1938 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 KIAA1551Q9HCM1 1747 aa6.3□□□□□ -1.4
GPHN-213ENST00000556501 STK36Q9NRP7 1315 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 CPLX1O14810 134 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 KINO60870 393 aaKnown RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 CDKL5O76039 1030 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 NTSR2O95665 410 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 CRKLP46109 303 aaKnown RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 ZNF165P49910 485 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 ZNF75DP51815 510 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 KIF23Q02241 960 aaPredicted RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 TRDNQ13061 729 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 SNW1Q13573 536 aaKnown RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 CACNA1SQ13698 1873 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 RASGRF1Q13972 1273 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 CCDC152Q4G0S7 254 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 MYSM1Q5VVJ2 828 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 SUSD4Q5VX71 490 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 APOA5Q6Q788 366 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 SARM1Q6SZW1 724 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 CYB5R4Q7L1T6 521 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 ZNF467Q7Z7K2 595 aaPredicted RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 PLA2G4DQ86XP0 818 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 FSIP1Q8NA03 581 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 SPATA5Q8NB90 893 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 KCNG4Q8TDN1 519 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 MRPS27Q92552 414 aaKnown RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 SYTL4Q96C24 671 aaPredicted RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 TMEM87BQ96K49 555 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 STRBPQ96SI9 672 aaKnown RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 UTP14AQ9BVJ6 771 aaKnown RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 DNAJC25Q9H1X3 360 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 KCNF1Q9H3M0 494 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 TTC12Q9H892 705 aaPredicted RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 EPB41L4AQ9HCS5 686 aaPredicted RBP6.29□□□□□ -1.4
GPHN-213ENST00000556501 DUOX1Q9NRD9 1551 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 POLR3EQ9NVU0 708 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 NHSQ6T4R5 1651 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 MYH6P13533 1939 aa6.29□□□□□ -1.4
GPHN-213ENST00000556501 NEDD4P46934 1319 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 SPATA31A5Q5VU36 1347 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 PNPLA7Q6ZV29 1317 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 SPATA31A7Q8IWB4 1347 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 LOC102724428A0A0B4J2F2 783 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 TESPA1A2RU30 521 aaPredicted RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 KIF28PB7ZC32 967 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 RRP9O43818 475 aaKnown RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 MBD4O95243 580 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 ME1P48163 572 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 SIK1P57059 783 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 CEBPZQ03701 1054 aaKnown RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 ITPK1Q13572 414 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 NOLC1Q14978 699 aaKnown RBP eCLIP6.28□□□□□ -1.4
GPHN-213ENST00000556501 IQCB1Q15051 598 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 STK38Q15208 465 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 E2F4Q16254 413 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 DDB1Q16531 1140 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 C11orf57Q6ZUT1 292 aaPredicted RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 SGMS1Q86VZ5 419 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 LINC00301Q8NCQ3 95 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 HELBQ8NG08 1087 aaPredicted RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 KIAA1524Q8TCG1 905 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 AIDAQ96BJ3 306 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 ZNF830Q96NB3 372 aaPredicted RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 CNNM2Q9H8M5 875 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 LY9Q9HBG7 655 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 PCDHA7Q9UN72 937 aa6.28□□□□□ -1.4
GPHN-213ENST00000556501 COL1A1P02452 1464 aaPredicted RBP6.28□□□□□ -1.4
GPHN-213ENST00000556501 MROH7-TTC4A0A0A0MT08 1334 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ZNF804BA4D1E1 1349 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 BTAF1O14981 1849 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 UQCRHLA0A096LP55 91 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 GOLGA8AA7E2F4 631 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 GSG1L2A8MUP6 293 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 B4E1Z4 1266 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PATL2C9JE40 543 aaKnown RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 DYNC1I1O14576 645 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 SEMA3EO15041 775 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 SPTLC2O15270 562 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PPFIA3O75145 1194 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 UQCRHP07919 91 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PRKAR2AP13861 404 aaKnown RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 GNAT2P19087 354 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 PTGS1P23219 599 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 ATP6V1AP38606 617 aa6.27□□□□□ -1.41
GPHN-213ENST00000556501 IGHMBP2P38935 993 aaKnown RBP6.27□□□□□ -1.41
GPHN-213ENST00000556501 LIFRP42702 1097 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms