RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 AOX1Q06278 1338 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 ZAP70P43403 619 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 Q6ZUG5 572 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 GREM2Q9H772 168 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 CHST3Q7LGC8 479 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 GOPCQ9HD26 462 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 GPAA1O43292 621 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 KCNQ2O43526 872 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 PTPDC1A2A3K4 754 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 BMP15O95972 392 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 SSR1P43307 286 aaKnown RBP13.94□□□□□ -0.18
NR4A1-215ENST00000550557 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 CNNM3Q8NE01 707 aa13.94□□□□□ -0.18
NR4A1-215ENST00000550557 PYM1Q9BRP8 204 aaKnown RBP13.94□□□□□ -0.18
NR4A1-215ENST00000550557 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 ARMC9Q7Z3E5 817 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
NR4A1-215ENST00000550557 GJB2P29033 226 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 TCERG1LQ5VWI1 586 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 ERCC4Q92889 916 aaPredicted RBP13.93□□□□□ -0.18
NR4A1-215ENST00000550557 KDRP35968 1356 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 RAD50Q92878 1312 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 MROH2AA6NES4 1674 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 PNMA6EA0A0J9YXQ4 647 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 BCAMP50895 628 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 RNF181Q9P0P0 153 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 ZBTB21Q9ULJ3 1066 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 CPSF1Q10570 1443 aaKnown RBP13.93□□□□□ -0.18
NR4A1-215ENST00000550557 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
NR4A1-215ENST00000550557 NOP56O00567 594 aaKnown RBP13.92□□□□□ -0.18
NR4A1-215ENST00000550557 CBFA2T2O43439 604 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 STX6O43752 255 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 LRRC7Q96NW7 1537 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 CRB1P82279 1406 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 KDM4FA0A1W2PPD8 638 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 IQSEC2Q5JU85 1478 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 ZNF532Q9HCE3 1301 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 PROSER3Q2NL68 480 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 FKBP15Q5T1M5 1219 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 RUFY1Q96T51 708 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 PKD2L1Q9P0L9 805 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
NR4A1-215ENST00000550557 SMTNL1A8MU46 457 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 KBTBD3Q8NAB2 608 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 B4E1Z4 1266 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 INTS4Q96HW7 963 aaKnown RBP13.91□□□□□ -0.18
NR4A1-215ENST00000550557 PPLO60437 1756 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 AGLP35573 1532 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
NR4A1-215ENST00000550557 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
NR4A1-215ENST00000550557 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
NR4A1-215ENST00000550557 USP25Q9UHP3 1055 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
NR4A1-215ENST00000550557 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
NR4A1-215ENST00000550557 CNGA1P29973 690 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 FRMPD1Q5SYB0 1578 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 BTDP43251 543 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 GRAPQ13588 217 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
NR4A1-215ENST00000550557 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
NR4A1-215ENST00000550557 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
NR4A1-215ENST00000550557 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 PDE8BO95263 885 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CWC15Q9P013 229 aaKnown RBP13.89□□□□□ -0.19
NR4A1-215ENST00000550557 GRIN3BO60391 1043 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 HS1BP3Q53T59 392 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 USP37Q86T82 979 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 FSIP1Q8NA03 581 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 RXRAP19793 462 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CLIP2Q9UDT6 1046 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 MYO6Q9UM54 1294 aa13.89□□□□□ -0.19
NR4A1-215ENST00000550557 CLTCQ00610 1675 aaKnown RBP13.89□□□□□ -0.19
NR4A1-215ENST00000550557 ZNF397Q8NF99 534 aaPredicted RBP13.89□□□□□ -0.19
NR4A1-215ENST00000550557 IBTKQ9P2D0 1353 aaPredicted RBP13.89□□□□□ -0.19
NR4A1-215ENST00000550557 TFAP4Q01664 338 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms