RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ANTXR2P58335 489 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 SLC39A14Q15043 492 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 LRRC24Q50LG9 513 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 MB21D2Q8IYB1 491 aaPredicted RBP15.82■□□□□ 0.12
HDAC7-228ENST00000548938 INTS13Q9NVM9 706 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 PPP2R2CQ9Y2T4 447 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 PKD1L3Q7Z443 1732 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
HDAC7-228ENST00000548938 TBC1D8O95759 1140 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 CAPN2P17655 700 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 SHC4Q6S5L8 630 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 WDR24Q96S15 920 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 TULP2O00295 520 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 CDK11BP21127 795 aaKnown RBP15.81■□□□□ 0.12
HDAC7-228ENST00000548938 EVA1CP58658 441 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 HSP90AA4PQ58FG1 418 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 ZCRB1Q8TBF4 217 aaKnown RBP15.81■□□□□ 0.12
HDAC7-228ENST00000548938 ZNF594Q96JF6 807 aaPredicted RBP15.81■□□□□ 0.12
HDAC7-228ENST00000548938 FANCLQ9NW38 375 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 HPSEQ9Y251 543 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 A0A1B0GUL7 405 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 SNRPA1P09661 255 aaKnown RBP15.81■□□□□ 0.12
HDAC7-228ENST00000548938 ST5P78524 1137 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 IMMTQ16891 758 aaKnown RBP15.81■□□□□ 0.12
HDAC7-228ENST00000548938 UBXN6Q9BZV1 441 aa15.81■□□□□ 0.12
HDAC7-228ENST00000548938 ZCCHC17Q9NP64 241 aaKnown RBP15.81■□□□□ 0.12
HDAC7-228ENST00000548938 ZSCAN12O43309 604 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
HDAC7-228ENST00000548938 TEX35Q5T0J7 233 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
HDAC7-228ENST00000548938 FCHSD1Q86WN1 690 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 GPR108Q9NPR9 543 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 FGAP02671 866 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 OAS2P29728 719 aaKnown RBP15.8■□□□□ 0.12
HDAC7-228ENST00000548938 GNG11P61952 73 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 WASHC4Q2M389 1173 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
HDAC7-228ENST00000548938 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
HDAC7-228ENST00000548938 CCDC34Q96HJ3 373 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 CLIC6Q96NY7 704 aa15.8■□□□□ 0.12
HDAC7-228ENST00000548938 VGLL3A8MV65 326 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 IL2RBP14784 551 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 IL15P40933 162 aaPredicted RBP15.79■□□□□ 0.12
HDAC7-228ENST00000548938 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 TPM1P09493 284 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 CDC27P30260 824 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 CABP4P57796 275 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 PDE4BQ07343 736 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 GNL2Q13823 731 aaKnown RBP15.79■□□□□ 0.12
HDAC7-228ENST00000548938 MPHOSPH8Q99549 860 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 PCDH11XQ9BZA7 1347 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 PCDH11YQ9BZA8 1340 aa15.79■□□□□ 0.12
HDAC7-228ENST00000548938 CASQ1P31415 396 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 PPP2R3AQ06190 1150 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 PTPAQ15257 358 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 TOGARAM2Q6ZUX3 1019 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
HDAC7-228ENST00000548938 FOXP4Q8IVH2 680 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-228ENST00000548938 PLBD2Q8NHP8 589 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 LTBP4Q8N2S1 1624 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 H7C1W4 665 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 BMP6P22004 513 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 MAP3K9P80192 1104 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 BAG1Q99933 345 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-228ENST00000548938 ALG1Q9BT22 464 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 PUS3Q9BZE2 481 aaKnown RBP15.78■□□□□ 0.12
HDAC7-228ENST00000548938 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 MRFAP1Q9Y605 127 aa15.78■□□□□ 0.12
HDAC7-228ENST00000548938 ROBO1Q9Y6N7 1651 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 EYA2O00167 538 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 ATP8B1O43520 1251 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 RXRAP19793 462 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 SMC1AQ14683 1233 aaKnown RBP15.77■□□□□ 0.12
HDAC7-228ENST00000548938 LONRF3Q496Y0 759 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 TICAM2Q86XR7 235 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 PDILTQ8N807 584 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 NCOA7Q8NI08 942 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 BTG4Q9NY30 223 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.12
HDAC7-228ENST00000548938 FOXN1O15353 648 aa15.77■□□□□ 0.11
HDAC7-228ENST00000548938 PPP6R2O75170 966 aa15.77■□□□□ 0.11
HDAC7-228ENST00000548938 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.11
HDAC7-228ENST00000548938 RESP18Q5W5W9 173 aa15.77■□□□□ 0.11
HDAC7-228ENST00000548938 GPR161Q8N6U8 529 aaKnown RBP15.77■□□□□ 0.11
HDAC7-228ENST00000548938 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
HDAC7-228ENST00000548938 C4BP0C0L5 1744 aa15.77■□□□□ 0.11
HDAC7-228ENST00000548938 ADKP55263 362 aaKnown RBP15.76■□□□□ 0.11
HDAC7-228ENST00000548938 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
HDAC7-228ENST00000548938 KRT40Q6A162 431 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 RSRC2Q7L4I2 434 aaKnown RBP15.76■□□□□ 0.11
HDAC7-228ENST00000548938 NKX2-3Q8TAU0 364 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 KIFC2Q96AC6 838 aa15.76■□□□□ 0.11
HDAC7-228ENST00000548938 PUS7LQ9H0K6 701 aaKnown RBP15.76■□□□□ 0.11
HDAC7-228ENST00000548938 DDX60Q8IY21 1712 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms