RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 DPCR1Q3MIW9 517 aa18.58■□□□□ 0.56
CHMP1A-202ENST00000535997 KRT40Q6A162 431 aa18.58■□□□□ 0.56
CHMP1A-202ENST00000535997 PFKFB1P16118 471 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 FILIP1Q7Z7B0 1213 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 SPATA5Q8NB90 893 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 OSBPL5Q9H0X9 879 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 C4AP0C0L4 1744 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 CCDC69A6NI79 296 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 WDHD1O75717 1129 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 U2AF2P26368 475 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 CDC27P30260 824 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 SYCP1Q15431 976 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 NTRK3Q16288 839 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 KCND1Q9NSA2 647 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 LRP6O75581 1613 aa18.57■□□□□ 0.56
CHMP1A-202ENST00000535997 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 NUP98P52948 1817 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 FAM177BA6PVY3 158 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 IARSP41252 1262 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 TPM4P67936 248 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 DHX8Q14562 1220 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 ANKRD7Q92527 254 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 MYO5AQ9Y4I1 1855 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 IFNL3Q8IZI9 196 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 FBXW7Q969H0 707 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 AIFM3Q96NN9 605 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 LY9Q9HBG7 655 aa18.56■□□□□ 0.56
CHMP1A-202ENST00000535997 UBN2Q6ZU65 1347 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 FAM237AA0A1B0GTK4 181 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 EXOC5O00471 708 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 SLC5A1P13866 664 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 SYKP43405 635 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 CCZ1BP86790 482 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 CCZ1P86791 482 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 GNL2Q13823 731 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 TRIM29Q14134 588 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 TMEM67Q5HYA8 995 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 NBPF11Q86T75 865 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 MICU3Q86XE3 530 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 ZSWIM5Q9P217 1185 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 HPSEQ9Y251 543 aa18.55■□□□□ 0.56
CHMP1A-202ENST00000535997 MARCKSP29966 332 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 PTPAQ15257 358 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 PHKBQ93100 1093 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 NAPBQ9H115 298 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 SENP2Q9HC62 589 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 FAM217BQ9NTX9 383 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 IKBKBO14920 756 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 RXRAP19793 462 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 CEP135Q66GS9 1140 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 CCDC112Q8NEF3 446 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 HELBQ8NG08 1087 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 MAP3K14Q99558 947 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 TUBE1Q9UJT0 475 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 SLC12A7Q9Y666 1083 aa18.54■□□□□ 0.56
CHMP1A-202ENST00000535997 NYAP1Q6ZVC0 841 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 MAGEB6Q8N7X4 407 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 KRT23Q9C075 422 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 GOLGA8AA7E2F4 631 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 NCAPHQ15003 741 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 PTPN14Q15678 1187 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 PDCL2Q8N4E4 241 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 WASF1Q92558 559 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 MPHOSPH8Q99549 860 aa18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.53■□□□□ 0.56
CHMP1A-202ENST00000535997 BIN1O00499 593 aa18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 IFIT3O14879 490 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 GNAT2P19087 354 aa18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 RASGRF1Q13972 1273 aa18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 AKNAD1Q5T1N1 836 aa18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 SHC4Q6S5L8 630 aa18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 XPO4Q9C0E2 1151 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-202ENST00000535997 RANBP6O60518 1105 aaKnown RBP18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 MBD4O95243 580 aa18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 EIF5P55010 431 aaKnown RBP18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 SSRP1Q08945 709 aaKnown RBP18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 RESP18Q5W5W9 173 aa18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 MFSD6Q6ZSS7 791 aa18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 CCAR2Q8N163 923 aaKnown RBP18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 MTA3Q9BTC8 594 aa18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 NACAP1Q9BZK3 213 aa18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 EPB41L4AQ9HCS5 686 aaPredicted RBP18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 IFNKQ9P0W0 207 aa18.52■□□□□ 0.55
CHMP1A-202ENST00000535997 MROH7-TTC4A0A0A0MT08 1334 aa18.51■□□□□ 0.55
CHMP1A-202ENST00000535997 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms