RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 HELLSQ9NRZ9 838 aa22.05■■□□□ 1.12
SMPD1-210ENST00000534405 ERVV-2B6SEH9 535 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 TDO2P48775 406 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 DHX8Q14562 1220 aaKnown RBP22.04■■□□□ 1.12
SMPD1-210ENST00000534405 ZRSR1Q15695 479 aaKnown RBP22.04■■□□□ 1.12
SMPD1-210ENST00000534405 STX1AQ16623 288 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 NBPF11Q86T75 865 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 SMARCC2Q8TAQ2 1214 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 CCDC189A1A4V9 331 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 SMC2O95347 1197 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 CTDNEP1O95476 244 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 DHX32Q7L7V1 743 aaKnown RBP22.04■■□□□ 1.12
SMPD1-210ENST00000534405 DSCC1Q9BVC3 393 aa22.04■■□□□ 1.12
SMPD1-210ENST00000534405 MAST3O60307 1309 aa22.03■■□□□ 1.12
SMPD1-210ENST00000534405 PFKFB2O60825 505 aa22.03■■□□□ 1.12
SMPD1-210ENST00000534405 HSPD1P10809 573 aaKnown RBP22.03■■□□□ 1.12
SMPD1-210ENST00000534405 APOBRQ0VD83 1088 aa22.03■■□□□ 1.12
SMPD1-210ENST00000534405 TRIM65Q6PJ69 517 aa22.03■■□□□ 1.12
SMPD1-210ENST00000534405 HOMER1Q86YM7 354 aa22.03■■□□□ 1.12
SMPD1-210ENST00000534405 DHX40Q8IX18 779 aaKnown RBP22.03■■□□□ 1.12
SMPD1-210ENST00000534405 PARP3Q9Y6F1 533 aa22.03■■□□□ 1.12
SMPD1-210ENST00000534405 PATL2C9JE40 543 aaKnown RBP22.02■■□□□ 1.12
SMPD1-210ENST00000534405 IFIT1P09914 478 aaKnown RBP22.02■■□□□ 1.12
SMPD1-210ENST00000534405 EXOSC10Q01780 885 aaKnown RBP22.02■■□□□ 1.12
SMPD1-210ENST00000534405 TADA2BQ86TJ2 420 aa22.02■■□□□ 1.12
SMPD1-210ENST00000534405 MSL3Q8N5Y2 521 aaKnown RBP22.02■■□□□ 1.12
SMPD1-210ENST00000534405 NSUN7Q8NE18 718 aaKnown RBP22.02■■□□□ 1.12
SMPD1-210ENST00000534405 EPC1Q9H2F5 836 aa22.02■■□□□ 1.12
SMPD1-210ENST00000534405 BECN2A8MW95 431 aa22.02■■□□□ 1.12
SMPD1-210ENST00000534405 JAKMIP3Q5VZ66 844 aa22.02■■□□□ 1.12
SMPD1-210ENST00000534405 VPS18Q9P253 973 aa22.02■■□□□ 1.12
SMPD1-210ENST00000534405 PAPPAQ13219 1627 aa22.02■■□□□ 1.12
SMPD1-210ENST00000534405 A0A087WUV0 522 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-210ENST00000534405 URI1O94763 535 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-210ENST00000534405 FOSBP53539 338 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 NKX1-1Q15270 411 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-210ENST00000534405 LONRF2Q1L5Z9 754 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 ARMCX5Q6P1M9 558 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 RSRC2Q7L4I2 434 aaKnown RBP22.01■■□□□ 1.11
SMPD1-210ENST00000534405 COL5A2P05997 1499 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-210ENST00000534405 H3BQV1 296 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 M0R2C6 588 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 IFFO2Q5TF58 517 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 PARD6BQ9BYG5 372 aa22.01■■□□□ 1.11
SMPD1-210ENST00000534405 E7EWF7 191 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 PPFIA3O75145 1194 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 DNAJC21Q5F1R6 531 aaKnown RBP22■■□□□ 1.11
SMPD1-210ENST00000534405 TTLL5Q6EMB2 1281 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 CHST3Q7LGC8 479 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 AGXT2Q9BYV1 514 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 FANCGO15287 622 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 RNF113AO15541 343 aaKnown RBP22■■□□□ 1.11
SMPD1-210ENST00000534405 NRDCO43847 1150 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 HMGB1P09429 215 aaKnown RBP22■■□□□ 1.11
SMPD1-210ENST00000534405 ADD1P35611 737 aaKnown RBP22■■□□□ 1.11
SMPD1-210ENST00000534405 CCT2P78371 535 aaKnown RBP22■■□□□ 1.11
SMPD1-210ENST00000534405 TRDNQ13061 729 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 RABGGTAQ92696 567 aa22■■□□□ 1.11
SMPD1-210ENST00000534405 CCDC151A5D8V7 595 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 CIAO1O76071 339 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 LRRC31Q6UY01 552 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 FTOQ9C0B1 505 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMPD1-210ENST00000534405 NCOA5Q9HCD5 579 aaKnown RBP21.99■■□□□ 1.11
SMPD1-210ENST00000534405 TNS2Q63HR2 1409 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 SHANK3Q9BYB0 1731 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 PTPDC1A2A3K4 754 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 SFPQP23246 707 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMPD1-210ENST00000534405 ADORA1P30542 326 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 GRIPAP1Q4V328 841 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 BICD2Q8TD16 824 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 OSBP2Q969R2 916 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 LLPHQ9BRT6 129 aaKnown RBP21.99■■□□□ 1.11
SMPD1-210ENST00000534405 ISCA1Q9BUE6 129 aa21.99■■□□□ 1.11
SMPD1-210ENST00000534405 CTAGE5O15320 804 aa21.98■■□□□ 1.11
SMPD1-210ENST00000534405 IL2RBP14784 551 aa21.98■■□□□ 1.11
SMPD1-210ENST00000534405 HSPA2P54652 639 aa21.98■■□□□ 1.11
SMPD1-210ENST00000534405 CEBPZQ03701 1054 aaKnown RBP21.98■■□□□ 1.11
SMPD1-210ENST00000534405 BRD3Q15059 726 aa21.98■■□□□ 1.11
SMPD1-210ENST00000534405 CCDC85AQ96PX6 553 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-210ENST00000534405 XIRP1Q702N8 1843 aaKnown RBP21.98■■□□□ 1.11
SMPD1-210ENST00000534405 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-210ENST00000534405 FOXP2O15409 715 aa21.97■■□□□ 1.11
SMPD1-210ENST00000534405 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.11
SMPD1-210ENST00000534405 PDE11AQ9HCR9 933 aa21.97■■□□□ 1.11
SMPD1-210ENST00000534405 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
SMPD1-210ENST00000534405 CEP126Q9P2H0 1117 aa21.96■■□□□ 1.11
SMPD1-210ENST00000534405 SALL1Q9NSC2 1324 aa21.96■■□□□ 1.11
SMPD1-210ENST00000534405 SCARF1Q14162 830 aa21.96■■□□□ 1.11
SMPD1-210ENST00000534405 HNRNPLLQ8WVV9 542 aaKnown RBP21.96■■□□□ 1.11
SMPD1-210ENST00000534405 FAM107BQ9H098 131 aa21.96■■□□□ 1.11
SMPD1-210ENST00000534405 GPHNQ9NQX3 736 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-210ENST00000534405 STRN4Q9NRL3 753 aa21.96■■□□□ 1.11
SMPD1-210ENST00000534405 AKAP2Q9Y2D5 859 aa21.96■■□□□ 1.11
SMPD1-210ENST00000534405 PPFIA4O75335 1185 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 PDIA3P30101 505 aaKnown RBP21.95■■□□□ 1.1
SMPD1-210ENST00000534405 MAP3K9P80192 1104 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 TCIRG1Q13488 830 aa21.95■■□□□ 1.1
SMPD1-210ENST00000534405 FAM89AQ96GI7 184 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms