RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ALG1Q9BT22 464 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 CNNM2Q9H8M5 875 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 B4E1Z4 1266 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 RBM6P78332 1123 aaKnown RBP19.56■□□□□ 0.72
VPS26B-206ENST00000531741 LRMPQ12912 555 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 NTRK3Q16288 839 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 CACTINQ8WUQ7 758 aaKnown RBP19.56■□□□□ 0.72
VPS26B-206ENST00000531741 TIGD1Q96MW7 591 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 LY9Q9HBG7 655 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 DENND2AQ9ULE3 1009 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 ECM29Q5VYK3 1845 aa19.56■□□□□ 0.72
VPS26B-206ENST00000531741 ZBTB43O43298 467 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 PPP6R2O75170 966 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 RASGRF1Q13972 1273 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 CCDC144BQ3MJ40 725 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 PARP10Q53GL7 1025 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 CCDC144CPQ8IYA2 1237 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 IFNL3Q8IZI9 196 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 NKX2-3Q8TAU0 364 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 MTA3Q9BTC8 594 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 PHLPP1O60346 1717 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 ZNF202O95125 648 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 GNAT2P19087 354 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 SUSD4Q5VX71 490 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
VPS26B-206ENST00000531741 RAB11FIP4Q86YS3 637 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 UTP14AQ9BVJ6 771 aaKnown RBP19.55■□□□□ 0.72
VPS26B-206ENST00000531741 EPB41L4AQ9HCS5 686 aaPredicted RBP19.55■□□□□ 0.72
VPS26B-206ENST00000531741 GJB4Q9NTQ9 266 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 CCDC87Q9NVE4 849 aa19.55■□□□□ 0.72
VPS26B-206ENST00000531741 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
VPS26B-206ENST00000531741 FAM237AA0A1B0GTK4 181 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 U2AF2P26368 475 aaKnown RBP eCLIP19.54■□□□□ 0.72
VPS26B-206ENST00000531741 CDC27P30260 824 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 KRT40Q6A162 431 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 LRRC8AQ8IWT6 810 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 JMYQ8N9B5 988 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
VPS26B-206ENST00000531741 MPHOSPH8Q99549 860 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 BCORQ6W2J9 1755 aa19.54■□□□□ 0.72
VPS26B-206ENST00000531741 AOPEPQ8N6M6 819 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 MAGEB6Q8N7X4 407 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 KRT23Q9C075 422 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 NAPBQ9H115 298 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 FAM217BQ9NTX9 383 aaPredicted RBP19.53■□□□□ 0.72
VPS26B-206ENST00000531741 MBD4O95243 580 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 SLC3A2P08195 630 aaKnown RBP19.53■□□□□ 0.72
VPS26B-206ENST00000531741 ZRSR1Q15695 479 aaKnown RBP19.53■□□□□ 0.72
VPS26B-206ENST00000531741 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 HELBQ8NG08 1087 aaPredicted RBP19.53■□□□□ 0.72
VPS26B-206ENST00000531741 KAT6BQ8WYB5 2073 aa19.53■□□□□ 0.72
VPS26B-206ENST00000531741 PFKFB1P16118 471 aa19.52■□□□□ 0.72
VPS26B-206ENST00000531741 IARSP41252 1262 aaKnown RBP19.52■□□□□ 0.72
VPS26B-206ENST00000531741 NLRP12P59046 1061 aa19.52■□□□□ 0.72
VPS26B-206ENST00000531741 CCDC152Q4G0S7 254 aa19.52■□□□□ 0.72
VPS26B-206ENST00000531741 AKNAD1Q5T1N1 836 aa19.52■□□□□ 0.72
VPS26B-206ENST00000531741 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.52■□□□□ 0.72
VPS26B-206ENST00000531741 HPSEQ9Y251 543 aa19.52■□□□□ 0.72
VPS26B-206ENST00000531741 GOLGA8AA7E2F4 631 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 GSG1L2A8MUP6 293 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 PTPAQ15257 358 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 MICU3Q86XE3 530 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 STAG1Q8WVM7 1258 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 SENP2Q9HC62 589 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.71
VPS26B-206ENST00000531741 WDHD1O75717 1129 aaPredicted RBP19.51■□□□□ 0.71
VPS26B-206ENST00000531741 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 RCAN1P53805 252 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 DPCR1Q3MIW9 517 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 NFXL1Q6ZNB6 911 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 WASF1Q92558 559 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 AIFM3Q96NN9 605 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 NACAP1Q9BZK3 213 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 KCND1Q9NSA2 647 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 IMPACTQ9P2X3 320 aa19.51■□□□□ 0.71
VPS26B-206ENST00000531741 THRAP3Q9Y2W1 955 aaKnown RBP19.51■□□□□ 0.71
VPS26B-206ENST00000531741 CTIFO43310 598 aaKnown RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 RANBP6O60518 1105 aaKnown RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 IFNAR1P17181 557 aa19.5■□□□□ 0.71
VPS26B-206ENST00000531741 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 GSDMDP57764 484 aa19.5■□□□□ 0.71
VPS26B-206ENST00000531741 TRIM29Q14134 588 aa19.5■□□□□ 0.71
VPS26B-206ENST00000531741 OSBPL5Q9H0X9 879 aaPredicted RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 SLC12A7Q9Y666 1083 aa19.5■□□□□ 0.71
VPS26B-206ENST00000531741 MROH7-TTC4A0A0A0MT08 1334 aa19.5■□□□□ 0.71
VPS26B-206ENST00000531741 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 IGHMBP2P38935 993 aaKnown RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 ERCC4Q92889 916 aaPredicted RBP19.5■□□□□ 0.71
VPS26B-206ENST00000531741 PHKBQ93100 1093 aa19.5■□□□□ 0.71
VPS26B-206ENST00000531741 BCL9LQ86UU0 1499 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 A0A087WWV3 80 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 IFIT3O14879 490 aaKnown RBP19.49■□□□□ 0.71
VPS26B-206ENST00000531741 NTSR2O95665 410 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 SSRP1Q08945 709 aaKnown RBP19.49■□□□□ 0.71
VPS26B-206ENST00000531741 MFSD6Q6ZSS7 791 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms