RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SF3A1Q15459 793 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 TPD52L1Q16890 204 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 ARMCX5Q6P1M9 558 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 CEP57L1Q8IYX8 460 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 BPIFA3Q9BQP9 254 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 LY9Q9HBG7 655 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 PRDM10Q9NQV6 1147 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 HPSEQ9Y251 543 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 LRP5O75197 1615 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 COL4A1P02462 1669 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 CMA1P23946 247 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 ARID4AP29374 1257 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 ISM2Q6H9L7 571 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 VPS37DQ86XT2 251 aa9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 STRBPQ96SI9 672 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 XPO4Q9C0E2 1151 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-210ENST00000518825 DHX16O60231 1041 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 U2AF2P26368 475 aaKnown RBP eCLIP9.82□□□□□ -0.841e-6■■■□□ 17.1
CTNNA1-210ENST00000518825 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 UBE3CQ15386 1083 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 LRRFIP1Q32MZ4 808 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 RALYLQ86SE5 291 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 FOXP4Q8IVH2 680 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 OSBPL5Q9H0X9 879 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 BCL9O00512 1426 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 KRT40Q6A162 431 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 CLIC6Q96NY7 704 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 ALG1Q9BT22 464 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 KCND1Q9NSA2 647 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 TRMT1Q9NXH9 659 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 CPLX1O14810 134 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 ATP1A3P13637 1013 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 ZSCAN20P17040 1043 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 GUCY1A2P33402 732 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 CBX1P83916 185 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 CEP135Q66GS9 1140 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 E4F1Q66K89 784 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 CCAR2Q8N163 923 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 PDCL2Q8N4E4 241 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
CTNNA1-210ENST00000518825 ANKRD18BA2A2Z9 1011 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 SPDYE4A6NLX3 237 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 SLC3A2P08195 630 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 METAP2P50579 478 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 NLRP12P59046 1061 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 MICU3Q86XE3 530 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 IFNKQ9P0W0 207 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 ZSWIM5Q9P217 1185 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 DOCK2Q92608 1830 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 ARAP2Q8WZ64 1704 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 STARD3NLO95772 234 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 BMP6P22004 513 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 EVA1CP58658 441 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 DPF2Q92785 391 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 TEX13AQ9BXU3 409 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.841e-6■■■■□ 21.3
CTNNA1-210ENST00000518825 TRMT112Q9UI30 125 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 TUBE1Q9UJT0 475 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 TBC1D2BQ9UPU7 963 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 DISP2A7MBM2 1401 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 FAM237AA0A1B0GTK4 181 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 PRKAB2O43741 272 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 RASGRF1Q13972 1273 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 SYTL4Q96C24 671 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 PAXBP1Q9Y5B6 917 aa9.81□□□□□ -0.84
CTNNA1-210ENST00000518825 SMIM22K7EJ46 135 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 GRIN1Q05586 938 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 PNOCQ13519 176 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 PTPN21Q16825 1174 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 SYNE3Q6ZMZ3 975 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 SGMS1Q86VZ5 419 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 METTL16Q86W50 562 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 FOXN1O15353 648 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 NEMFO60524 1076 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 APPP05067 770 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 TOB1P50616 345 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 LONRF3Q496Y0 759 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 SMAP1Q8IYB5 467 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 ZNF34Q8IZ26 560 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 ZNF592Q92610 1267 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 CHMP4CQ96CF2 233 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 NAT10Q9H0A0 1025 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 ZNF335Q9H4Z2 1342 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 STRCQ7RTU9 1775 aa9.8□□□□□ -0.84
CTNNA1-210ENST00000518825 GSG1L2A8MUP6 293 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 FANCGO15287 622 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 PDE8AO60658 829 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 SYCP1Q15431 976 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 RESP18Q5W5W9 173 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 IFNL3Q8IZI9 196 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 SEC31BQ9NQW1 1179 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 BTG4Q9NY30 223 aa9.79□□□□□ -0.84
CTNNA1-210ENST00000518825 PPP6R2O75170 966 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms