RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 CCDC175P0C221 793 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CALM1P0DP23 149 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CALM2P0DP24 149 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CALM3P0DP25 149 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ADD1P35611 737 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PPP1R2P41236 205 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LIFRP42702 1097 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 UBASH3AP57075 661 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FANCCQ00597 558 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 AKAP17AQ02040 695 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KIF23Q02241 960 aaPredicted RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 APOBRQ0VD83 1088 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TRIM28Q13263 835 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SF3B2Q13435 895 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 UBE3CQ15386 1083 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MAP9Q49MG5 647 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TPRNQ4KMQ1 711 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NOM1Q5C9Z4 860 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC70Q6NSX1 233 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LMOD2Q6P5Q4 547 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 C11orf57Q6ZUT1 292 aaPredicted RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TMC6Q7Z403 805 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SGMS1Q86VZ5 419 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CNGA4Q8IV77 575 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 GPR161Q8N6U8 529 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CEP112Q8N8E3 955 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KRI1Q8N9T8 703 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NFATC2IPQ8NCF5 419 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 EHBP1Q8NDI1 1231 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CNNM3Q8NE01 707 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LRRC59Q96AG4 307 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZNF496Q96IT1 587 aaPredicted RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PPP1R13BQ96KQ4 1090 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PANX2Q96RD6 677 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FOXP1Q9H334 677 aaPredicted RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ARFGAP3Q9NP61 516 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZNHIT6Q9NWK9 470 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TUBE1Q9UJT0 475 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PRDM4Q9UKN5 801 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PCDHA7Q9UN72 937 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 USP16Q9Y5T5 823 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DUOX1Q9NRD9 1551 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC88AQ3V6T2 1871 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MYH1P12882 1939 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 BCORQ6W2J9 1755 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ITGB4P16144 1822 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 A0A0U1RQG5 324 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ANKRD18BA2A2Z9 1011 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC151A5D8V7 595 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 GOLGA8AA7E2F4 631 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 AP5Z1O43299 807 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KCNQ3O43525 872 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KIF5CO60282 957 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 IPO7O95373 1038 aaKnown RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DEXIO95424 95 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PCCAP05165 728 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MYL1P05976 194 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 H2AFXP16104 143 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PFKFB1P16118 471 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TRHP20396 242 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 U2AF2P26368 475 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CASQ1P31415 396 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TXLNAP40222 546 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 IARSP41252 1262 aaKnown RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CEBPAP49715 358 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NDUFA8P51970 172 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CASP7P55210 303 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PIP4K2BP78356 416 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FOXO4P98177 505 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FKBP4Q02790 459 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CEBPZQ03701 1054 aaKnown RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SSRP1Q08945 709 aaKnown RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MAP3K12Q12852 859 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LRMPQ12912 555 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 BRD3Q15059 726 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NKX1-1Q15270 411 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TERF2Q15554 542 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ALX1Q15699 326 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ELF2Q15723 593 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ATP2B3Q16720 1220 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TSR1Q2NL82 804 aaKnown RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DPCR1Q3MIW9 517 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC144BQ3MJ40 725 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 HSP90B2PQ58FF3 399 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NT5DC1Q5TFE4 455 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RESP18Q5W5W9 173 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SPECC1LQ69YQ0 1117 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 APOA5Q6Q788 366 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NFXL1Q6ZNB6 911 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ATG9AQ7Z3C6 839 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LRP10Q7Z4F1 713 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PPFIBP1Q86W92 1011 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 VPS37DQ86XT2 251 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NOSTRINQ8IVI9 506 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 VSTM4Q8IW00 320 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC144CPQ8IYA2 1237 aa3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MB21D2Q8IYB1 491 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZBTB38Q8NAP3 1195 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RUBCNQ92622 972 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms