RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 ZBTB43O43298 467 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 SLC39A14Q15043 492 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
SEC31A-227ENST00000508502 BCL9O00512 1426 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 SNAP23O00161 211 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 MYO5AQ9Y4I1 1855 aaKnown RBP11.32□□□□□ -0.6
SEC31A-227ENST00000508502 MROH7-TTC4A0A0A0MT08 1334 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
SEC31A-227ENST00000508502 GOLGA8AA7E2F4 631 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
SEC31A-227ENST00000508502 RBM6P78332 1123 aaKnown RBP11.32□□□□□ -0.6
SEC31A-227ENST00000508502 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 ZNF592Q92610 1267 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 ITGB4P16144 1822 aa11.32□□□□□ -0.6
SEC31A-227ENST00000508502 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
SEC31A-227ENST00000508502 MBD4O95243 580 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 SMC2O95347 1197 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 NLRP12P59046 1061 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 ISM2Q6H9L7 571 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 NAPBQ9H115 298 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 LRP6O75581 1613 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 SLC5A1P13866 664 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 FGFR2P21802 821 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 TRIM29Q14134 588 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 MYH3P11055 1940 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
SEC31A-227ENST00000508502 SYKP43405 635 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 CCZ1BP86790 482 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 CCZ1P86791 482 aaPredicted RBP11.31□□□□□ -0.6
SEC31A-227ENST00000508502 MAP3K12Q12852 859 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 RASGRF1Q13972 1273 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 CEP135Q66GS9 1140 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 ZNF34Q8IZ26 560 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 IFNL3Q8IZI9 196 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 BPIFA3Q9BQP9 254 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 EPB41L4AQ9HCS5 686 aaPredicted RBP11.31□□□□□ -0.6
SEC31A-227ENST00000508502 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 PAXBP1Q9Y5B6 917 aa11.31□□□□□ -0.6
SEC31A-227ENST00000508502 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.31□□□□□ -0.6
SEC31A-227ENST00000508502 IFIT3O14879 490 aaKnown RBP11.3□□□□□ -0.6
SEC31A-227ENST00000508502 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
SEC31A-227ENST00000508502 IL6STP40189 918 aaPredicted RBP11.3□□□□□ -0.6
SEC31A-227ENST00000508502 ALX1Q15699 326 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
SEC31A-227ENST00000508502 IFNKQ9P0W0 207 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 A0A0G2JS52 829 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 NTRK3Q16288 839 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 PDCL2Q8N4E4 241 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 JMYQ8N9B5 988 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 CCDC112Q8NEF3 446 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 MPHOSPH8Q99549 860 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
SEC31A-227ENST00000508502 TRMT1Q9NXH9 659 aaKnown RBP11.3□□□□□ -0.6
SEC31A-227ENST00000508502 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 EXOC5O00471 708 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 GSDMDP57764 484 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 TPM4P67936 248 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 SLC26A6Q9BXS9 759 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
SEC31A-227ENST00000508502 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
SEC31A-227ENST00000508502 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 ANKRD7Q92527 254 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 TOMM22Q9NS69 142 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 NUP98P52948 1817 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 PPP6R2O75170 966 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
SEC31A-227ENST00000508502 PTPAQ15257 358 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 CLIC6Q96NY7 704 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 PRKAB2O43741 272 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 TMC6Q7Z403 805 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 STK11IPQ8N1F8 1099 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 MAP3K14Q99558 947 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 IMPACTQ9P2X3 320 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 TACC3Q9Y6A5 838 aa11.29□□□□□ -0.6
SEC31A-227ENST00000508502 U2AF2P26368 475 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■■□□□ 14.5
SEC31A-227ENST00000508502 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
SEC31A-227ENST00000508502 LIFRP42702 1097 aa11.28□□□□□ -0.6
SEC31A-227ENST00000508502 NCAPHQ15003 741 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms