RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CWC25Q9NXE8 425 aaPredicted RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 TTF2Q9UNY4 1162 aaKnown RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
HTT-202ENST00000502820 COL1A1P02452 1464 aaPredicted RBP6.47□□□□□ -1.37
HTT-202ENST00000502820 ELL2O00472 640 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 EIF5BO60841 1220 aaKnown RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 HOXB7P09629 217 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 ZNF853P0CG23 659 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 HOXD11P31277 338 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 ATN1P54259 1190 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 CTSWP56202 376 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 TRIM32Q13049 653 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 CCDC85BQ15834 202 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 FAM109BQ6ICB4 259 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 ANKRD2Q9GZV1 360 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 PRDM5Q9NQX1 630 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 TMOD2Q9NZR1 351 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 DBF4Q9UBU7 674 aaPredicted RBP6.46□□□□□ -1.38
HTT-202ENST00000502820 CHMP3Q9Y3E7 222 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 HCN4Q9Y3Q4 1203 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 CUL9Q8IWT3 2517 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 SCN9AQ15858 1988 aa6.46□□□□□ -1.38
HTT-202ENST00000502820 APAF1O14727 1248 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 FRAT2O75474 233 aaPredicted RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 PCCAP05165 728 aaPredicted RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 INPP5BP32019 993 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 PPIL2Q13356 520 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 PDE3AQ14432 1141 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 SHHQ15465 462 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 LRRC26Q2I0M4 334 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 SPDYE2Q495Y8 402 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 CCDC184Q52MB2 194 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 ZNF804AQ7Z570 1209 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 DZIP1LQ8IYY4 767 aaKnown RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 ANKRD13CQ8N6S4 541 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 USP38Q8NB14 1042 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 MTMR14Q8NCE2 650 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 ADAMTS19Q8TE59 1207 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 PKNOX2Q96KN3 472 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 TEPSINQ96N21 525 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 UHRF1Q96T88 793 aaPredicted RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 SENP6Q9GZR1 1112 aaPredicted RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 CRISPLD2Q9H0B8 497 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 PHAXQ9H814 394 aaKnown RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 ZCCHC17Q9NP64 241 aaKnown RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 PAK6Q9NQU5 681 aaPredicted RBP6.45□□□□□ -1.38
HTT-202ENST00000502820 HYPKQ9NX55 129 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 FAM205AQ6ZU69 1335 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 ADGRA2Q96PE1 1338 aa6.45□□□□□ -1.38
HTT-202ENST00000502820 CEP290O15078 2479 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 ZSWIM8A7E2V4 1837 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 CYP2B6P20813 491 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 CRKP46108 304 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 PPATQ06203 517 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 CHRNDQ07001 517 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 TCP10Q12799 353 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 CHAF1AQ13111 956 aaPredicted RBP6.44□□□□□ -1.38
HTT-202ENST00000502820 MFSD14BQ5SR56 506 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 L1TD1Q5T7N2 865 aaKnown RBP6.44□□□□□ -1.38
HTT-202ENST00000502820 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 ANKLE1Q8NAG6 615 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 PXYLP1Q8TE99 480 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 NECAB3Q96P71 396 aaPredicted RBP6.44□□□□□ -1.38
HTT-202ENST00000502820 ZNF341Q9BYN7 854 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 MBIPQ9NS73 344 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 IQSEC3Q9UPP2 1182 aaPredicted RBP6.44□□□□□ -1.38
HTT-202ENST00000502820 KCNH4Q9UQ05 1017 aa6.44□□□□□ -1.38
HTT-202ENST00000502820 LRRC37AA6NMS7 1700 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 DDX60Q8IY21 1712 aaKnown RBP6.43□□□□□ -1.38
HTT-202ENST00000502820 RRP9O43818 475 aaKnown RBP6.43□□□□□ -1.38
HTT-202ENST00000502820 HMGCRP04035 888 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 IGFBP4P22692 258 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 ITGA6P23229 1130 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 NCBP3Q53F19 620 aaKnown RBP6.43□□□□□ -1.38
HTT-202ENST00000502820 TAF7LQ5H9L4 462 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 C9orf50Q5SZB4 431 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 MICALL1Q8N3F8 863 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 CCDC191Q8NCU4 936 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 TTLL11Q8NHH1 800 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 HOOK2Q96ED9 719 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 TTYH1Q9H313 450 aaPredicted RBP6.43□□□□□ -1.38
HTT-202ENST00000502820 CWC22Q9HCG8 908 aaKnown RBP6.43□□□□□ -1.38
HTT-202ENST00000502820 IFT57Q9NWB7 429 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 ISY1Q9ULR0 285 aaKnown RBP6.43□□□□□ -1.38
HTT-202ENST00000502820 ATP11BQ9Y2G3 1177 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 PFASO15067 1338 aa6.43□□□□□ -1.38
HTT-202ENST00000502820 LAMB2P55268 1798 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 TRIM75PA6NK02 468 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 DDX58O95786 925 aaKnown RBP6.42□□□□□ -1.38
HTT-202ENST00000502820 BCRP11274 1271 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 PRKAR2AP13861 404 aaKnown RBP6.42□□□□□ -1.38
HTT-202ENST00000502820 CNGA1P29973 690 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 CALD1Q05682 793 aaKnown RBP6.42□□□□□ -1.38
HTT-202ENST00000502820 TRIM28Q13263 835 aaKnown RBP6.42□□□□□ -1.38
HTT-202ENST00000502820 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 SKIV2LQ15477 1246 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms