RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LDHBP07195 334 aaKnown RBP7.01□□□□□ -1.29
XRN1-213ENST00000489241 ITPKAP23677 461 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 IRAK1P51617 712 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
XRN1-213ENST00000489241 POU4F3Q15319 338 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 NFKBIBQ15653 356 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 FBXL6Q8N531 539 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 FBF1Q8TES7 1133 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 FBLIM1Q8WUP2 373 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
XRN1-213ENST00000489241 CCDC74AQ96AQ1 378 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 TRIM56Q9BRZ2 755 aaKnown RBP7.01□□□□□ -1.29
XRN1-213ENST00000489241 LEMD3Q9Y2U8 911 aa7.01□□□□□ -1.29
XRN1-213ENST00000489241 CTSBP07858 339 aa7□□□□□ -1.29
XRN1-213ENST00000489241 PTPN12Q05209 780 aaKnown RBP7□□□□□ -1.29
XRN1-213ENST00000489241 FRMD6Q96NE9 622 aa7□□□□□ -1.29
XRN1-213ENST00000489241 CORO1BQ9BR76 489 aa7□□□□□ -1.29
XRN1-213ENST00000489241 METTL22Q9BUU2 404 aaPredicted RBP7□□□□□ -1.29
XRN1-213ENST00000489241 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
XRN1-213ENST00000489241 PPP4R2Q9NY27 417 aa7□□□□□ -1.29
XRN1-213ENST00000489241 ADAMTS4O75173 837 aa6.99□□□□□ -1.29
XRN1-213ENST00000489241 PRPF40AO75400 957 aaKnown RBP6.99□□□□□ -1.29
XRN1-213ENST00000489241 WNT11O96014 354 aa6.99□□□□□ -1.29
XRN1-213ENST00000489241 FOSL1P15407 271 aa6.99□□□□□ -1.29
XRN1-213ENST00000489241 HOXA10P31260 410 aaPredicted RBP6.99□□□□□ -1.29
XRN1-213ENST00000489241 ITGAEP38570 1179 aa6.99□□□□□ -1.29
XRN1-213ENST00000489241 PRPF40BQ6NWY9 871 aaKnown RBP6.99□□□□□ -1.29
XRN1-213ENST00000489241 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
XRN1-213ENST00000489241 ACTL7BQ9Y614 415 aa6.99□□□□□ -1.29
XRN1-213ENST00000489241 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
XRN1-213ENST00000489241 XPCQ01831 940 aaPredicted RBP6.98□□□□□ -1.29
XRN1-213ENST00000489241 MSMPQ1L6U9 139 aa6.98□□□□□ -1.29
XRN1-213ENST00000489241 ZAR1Q86SH2 424 aa6.98□□□□□ -1.29
XRN1-213ENST00000489241 TBC1D32Q96NH3 1257 aa6.98□□□□□ -1.29
XRN1-213ENST00000489241 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
XRN1-213ENST00000489241 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
XRN1-213ENST00000489241 AP4E1Q9UPM8 1137 aa6.98□□□□□ -1.29
XRN1-213ENST00000489241 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.97□□□□□ -1.29
XRN1-213ENST00000489241 GIPC1O14908 333 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 RAB6AP20340 208 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 AP3B2Q13367 1082 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 MAP7Q14244 749 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 AKAP4Q5JQC9 854 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 WWC3Q9ULE0 1092 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 TRAK1Q9UPV9 953 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 SPG7Q9UQ90 795 aa6.97□□□□□ -1.29
XRN1-213ENST00000489241 PAX4O43316 350 aa6.96□□□□□ -1.3
XRN1-213ENST00000489241 ECEL1O95672 775 aa6.96□□□□□ -1.3
XRN1-213ENST00000489241 VAMP1P23763 118 aa6.96□□□□□ -1.3
XRN1-213ENST00000489241 ADMP35318 185 aa6.96□□□□□ -1.3
XRN1-213ENST00000489241 RPS26P11Q5JNZ5 115 aaPredicted RBP6.96□□□□□ -1.3
XRN1-213ENST00000489241 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
XRN1-213ENST00000489241 EPS8L3Q8TE67 593 aaKnown RBP6.96□□□□□ -1.3
XRN1-213ENST00000489241 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
XRN1-213ENST00000489241 ANGEL1Q9UNK9 670 aaKnown RBP6.96□□□□□ -1.3
XRN1-213ENST00000489241 PDE3AQ14432 1141 aa6.95□□□□□ -1.3
XRN1-213ENST00000489241 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.95□□□□□ -1.3
XRN1-213ENST00000489241 SHISA5Q8N114 240 aa6.95□□□□□ -1.3
XRN1-213ENST00000489241 GATA6Q92908 595 aa6.95□□□□□ -1.3
XRN1-213ENST00000489241 DUSP9Q99956 384 aaKnown RBP6.95□□□□□ -1.3
XRN1-213ENST00000489241 SEMA6CQ9H3T2 930 aa6.95□□□□□ -1.3
XRN1-213ENST00000489241 GSX1Q9H4S2 264 aaPredicted RBP6.95□□□□□ -1.3
XRN1-213ENST00000489241 FAM105AQ9NUU6 356 aa6.95□□□□□ -1.3
XRN1-213ENST00000489241 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
XRN1-213ENST00000489241 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 LOC105371045A0A1W2PR82 267 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 AOC2O75106 756 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 PRNPP04156 253 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 NFICP08651 508 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 TAL1P17542 331 aaPredicted RBP6.94□□□□□ -1.3
XRN1-213ENST00000489241 GNA15P30679 374 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 GRM2Q14416 872 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 SETDB2Q96T68 719 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 WDR18Q9BV38 432 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
XRN1-213ENST00000489241 FAM170BA6NMN3 283 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 CYP26A1O43174 497 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 TCF3P15923 654 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 ASPAP45381 313 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 DAB2P98082 770 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 HNRNPUQ00839 825 aaKnown RBP eCLIP6.93□□□□□ -1.3
XRN1-213ENST00000489241 CYP27A1Q02318 531 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 PSMD2Q13200 908 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 GLIS3Q8NEA6 775 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 MRS2Q9HD23 443 aa6.93□□□□□ -1.3
XRN1-213ENST00000489241 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
XRN1-213ENST00000489241 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 DUSP27Q5VZP5 1158 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 FMNL2Q96PY5 1086 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 BCO2Q9BYV7 579 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 ADGRE2Q9UHX3 823 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 AK5Q9Y6K8 562 aa6.92□□□□□ -1.3
XRN1-213ENST00000489241 TMPRSS2O15393 492 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 SORBS3O60504 671 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms