RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.23
ABCB1-207ENST00000488737 LIFRP42702 1097 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.23
ABCB1-207ENST00000488737 GLIPR1L2Q4G1C9 344 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 DHX40Q8IX18 779 aaKnown RBP16.52■□□□□ 0.23
ABCB1-207ENST00000488737 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.23
ABCB1-207ENST00000488737 SDF4Q9BRK5 362 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 CNNM2Q9H8M5 875 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 CCDC87Q9NVE4 849 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 STK36Q9NRP7 1315 aa16.52■□□□□ 0.23
ABCB1-207ENST00000488737 A0A1B0GVL5 298 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 KIF28PB7ZC32 967 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 CMA1P23946 247 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 NDUFA8P51970 172 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
ABCB1-207ENST00000488737 FAM13BQ9NYF5 915 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 KIAA1468Q9P260 1216 aa16.51■□□□□ 0.23
ABCB1-207ENST00000488737 B4E1Z4 1266 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 ZBTB43O43298 467 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 GNAT2P19087 354 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 SLC39A14Q15043 492 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 NEDD4P46934 1319 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
ABCB1-207ENST00000488737 RASGRF1Q13972 1273 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 AXDND1Q5T1B0 1012 aaPredicted RBP16.5■□□□□ 0.23
ABCB1-207ENST00000488737 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
ABCB1-207ENST00000488737 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 JMYQ8N9B5 988 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 TIGD1Q96MW7 591 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 KRT23Q9C075 422 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 NAPBQ9H115 298 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
ABCB1-207ENST00000488737 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
ABCB1-207ENST00000488737 PPP6R2O75170 966 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 MBD4O95243 580 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 RBM6P78332 1123 aaKnown RBP16.49■□□□□ 0.23
ABCB1-207ENST00000488737 ZRSR1Q15695 479 aaKnown RBP16.49■□□□□ 0.23
ABCB1-207ENST00000488737 NTRK3Q16288 839 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 KRT40Q6A162 431 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
ABCB1-207ENST00000488737 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
ABCB1-207ENST00000488737 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
ABCB1-207ENST00000488737 MYH14Q7Z406 1995 aaKnown RBP16.48■□□□□ 0.23
ABCB1-207ENST00000488737 FAM237AA0A1B0GTK4 181 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 ZNF202O95125 648 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.23
ABCB1-207ENST00000488737 CDC27P30260 824 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 IGHMBP2P38935 993 aaKnown RBP16.48■□□□□ 0.23
ABCB1-207ENST00000488737 IARSP41252 1262 aaKnown RBP16.48■□□□□ 0.23
ABCB1-207ENST00000488737 LRMPQ12912 555 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 AKNAD1Q5T1N1 836 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 AOPEPQ8N6M6 819 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 CACTINQ8WUQ7 758 aaKnown RBP16.48■□□□□ 0.23
ABCB1-207ENST00000488737 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
ABCB1-207ENST00000488737 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
ABCB1-207ENST00000488737 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
ABCB1-207ENST00000488737 RCAN1P53805 252 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 NLRP12P59046 1061 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 TRIM29Q14134 588 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 LRRC8AQ8IWT6 810 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 NKX2-3Q8TAU0 364 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 WASF1Q92558 559 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
ABCB1-207ENST00000488737 PFKFB1P16118 471 aa16.46■□□□□ 0.23
ABCB1-207ENST00000488737 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
ABCB1-207ENST00000488737 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
ABCB1-207ENST00000488737 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
ABCB1-207ENST00000488737 CCDC69A6NI79 296 aa16.46■□□□□ 0.22
ABCB1-207ENST00000488737 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.22
ABCB1-207ENST00000488737 NTSR2O95665 410 aa16.46■□□□□ 0.22
ABCB1-207ENST00000488737 IFNAR1P17181 557 aa16.46■□□□□ 0.22
ABCB1-207ENST00000488737 SSRP1Q08945 709 aaKnown RBP16.46■□□□□ 0.22
ABCB1-207ENST00000488737 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.22
ABCB1-207ENST00000488737 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.22
ABCB1-207ENST00000488737 AIFM3Q96NN9 605 aa16.46■□□□□ 0.22
ABCB1-207ENST00000488737 ARMT1Q9H993 441 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms