RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 CCDC83Q8IWF9 413 aa29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 LRRC2Q9BYS8 371 aa29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 ZNF646O15015 1829 aaPredicted RBP29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 TNPO1Q92973 898 aaKnown RBP29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 BRF1Q92994 677 aa29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 AATFQ9NY61 560 aaKnown RBP eCLIP29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 ANAPC4Q9UJX5 808 aa29.91■■■□□ 2.38
TNFRSF25-215ENST00000485036 TRDNQ13061 729 aa29.9■■■□□ 2.38
TNFRSF25-215ENST00000485036 MFSD14BQ5SR56 506 aa29.9■■■□□ 2.38
TNFRSF25-215ENST00000485036 ANTXR2P58335 489 aa29.89■■■□□ 2.38
TNFRSF25-215ENST00000485036 CRNKL1Q9BZJ0 848 aaKnown RBP29.89■■■□□ 2.38
TNFRSF25-215ENST00000485036 MROH7-TTC4A0A0A0MT08 1334 aa29.89■■■□□ 2.37
TNFRSF25-215ENST00000485036 NEDD4P46934 1319 aa29.89■■■□□ 2.37
TNFRSF25-215ENST00000485036 FGD1P98174 961 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 STAG1Q8WVM7 1258 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 SUGT1Q9Y2Z0 365 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 CDK5RAP2Q96SN8 1893 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 PRC1O43663 620 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 LDHCP07864 332 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 EVCP57679 992 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 PPP4CP60510 307 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 PKP1Q13835 747 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 AKNAD1Q5T1N1 836 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 NECAB1Q8N987 351 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 MTFR1LQ9H019 292 aa29.88■■■□□ 2.37
TNFRSF25-215ENST00000485036 GTF2IP78347 998 aa29.87■■■□□ 2.37
TNFRSF25-215ENST00000485036 GTF3C6Q969F1 213 aa29.87■■■□□ 2.37
TNFRSF25-215ENST00000485036 CNNM2Q9H8M5 875 aa29.87■■■□□ 2.37
TNFRSF25-215ENST00000485036 ATP8A2Q9NTI2 1148 aa29.87■■■□□ 2.37
TNFRSF25-215ENST00000485036 CTDSPL2Q05D32 466 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 PPARAQ07869 468 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 DIXDC1Q155Q3 683 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 CLEC17AQ6ZS10 378 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 CHST3Q7LGC8 479 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 CERS3Q8IU89 383 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 SMC3Q9UQE7 1217 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 TACC3Q9Y6A5 838 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 NAV1Q8NEY1 1877 aa29.86■■■□□ 2.37
TNFRSF25-215ENST00000485036 KCNA3P22001 575 aa29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 GRIPAP1Q4V328 841 aa29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 FAM163AQ96GL9 167 aaPredicted RBP29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 ZDHHC9Q9Y397 364 aa29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 ZBTB7AO95365 584 aa29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 PODNQ7Z5L7 613 aa29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 TTLL6Q8N841 843 aa29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 DCP1AQ9NPI6 582 aaPredicted RBP29.85■■■□□ 2.37
TNFRSF25-215ENST00000485036 GAKO14976 1311 aa29.84■■■□□ 2.37
TNFRSF25-215ENST00000485036 PFKFB2O60825 505 aa29.84■■■□□ 2.37
TNFRSF25-215ENST00000485036 DOK7Q18PE1 504 aa29.84■■■□□ 2.37
TNFRSF25-215ENST00000485036 ZNF274Q96GC6 653 aaPredicted RBP29.84■■■□□ 2.37
TNFRSF25-215ENST00000485036 RNF41Q9H4P4 317 aaPredicted RBP29.84■■■□□ 2.37
TNFRSF25-215ENST00000485036 DDX60LQ5H9U9 1706 aaKnown RBP29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 SCN9AQ15858 1988 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 B4E1Z4 1266 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 BRD1O95696 1058 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 BAG3O95817 575 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 APOBRQ0VD83 1088 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 MFSD6Q6ZSS7 791 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 SLF2Q8IX21 1173 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 NKX2-3Q8TAU0 364 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 KRT23Q9C075 422 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 BRCA1P38398 1863 aaKnown RBP29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 FOCADQ5VW36 1801 aa29.83■■■□□ 2.37
TNFRSF25-215ENST00000485036 DPEP1P16444 411 aa29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 CYB5R4Q7L1T6 521 aa29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 ZNF219Q9P2Y4 722 aaPredicted RBP29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 GPR75-ASB3A0A0A6YYF3 556 aa29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 CTR9Q6PD62 1173 aa29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 SUPT20HQ8NEM7 779 aa29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 MKRN1Q9UHC7 482 aaKnown RBP29.82■■■□□ 2.36
TNFRSF25-215ENST00000485036 POLD1P28340 1107 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 GJB2P29033 226 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 MCM4P33991 863 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 STK3Q13188 491 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 SBK1Q52WX2 424 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 CERS5Q8N5B7 392 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 NOL10Q9BSC4 688 aaKnown RBP29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 PSME4Q14997 1843 aa29.81■■■□□ 2.36
TNFRSF25-215ENST00000485036 TGFB2P61812 414 aa29.8■■■□□ 2.36
TNFRSF25-215ENST00000485036 KIAA2012Q0VF49 1180 aa29.8■■■□□ 2.36
TNFRSF25-215ENST00000485036 TMEM87BQ96K49 555 aa29.8■■■□□ 2.36
TNFRSF25-215ENST00000485036 GBP4Q96PP9 640 aa29.8■■■□□ 2.36
TNFRSF25-215ENST00000485036 ARPP21Q9UBL0 812 aaPredicted RBP29.8■■■□□ 2.36
TNFRSF25-215ENST00000485036 G3V3G9 751 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 C21orf2O43822 256 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 FGRP09769 529 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 PCP11498 1178 aaKnown RBP29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 SCRN1Q12765 414 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 DCAF8Q5TAQ9 597 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 SH3RF3Q8TEJ3 882 aaPredicted RBP29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 INCENPQ9NQS7 918 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 GPHNQ9NQX3 736 aaPredicted RBP29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 MINDY4BA8MYZ0 360 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 SH2B2O14492 632 aaPredicted RBP29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 PDIA3P30101 505 aaKnown RBP29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 FKBP1AP62942 108 aaKnown RBP29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 CCDC93Q567U6 631 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 MTA3Q9BTC8 594 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 DBNDD1Q9H9R9 158 aa29.79■■■□□ 2.36
TNFRSF25-215ENST00000485036 ANGEL1Q9UNK9 670 aaKnown RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms