RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 KRBA2Q6ZNG9 492 aa22.73■■□□□ 1.23
RPUSD3-216ENST00000484134 TXLNBQ8N3L3 684 aa22.73■■□□□ 1.23
RPUSD3-216ENST00000484134 DENND2AQ9ULE3 1009 aa22.73■■□□□ 1.23
RPUSD3-216ENST00000484134 PCDHA5Q9Y5H7 936 aa22.73■■□□□ 1.23
RPUSD3-216ENST00000484134 ADKP55263 362 aaKnown RBP22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 HSP90AB3PQ58FF7 597 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 TC2NQ8N9U0 490 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 GPR108Q9NPR9 543 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 FKBP4Q02790 459 aaKnown RBP eCLIP22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 VPS37DQ86XT2 251 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 PDILTQ8N807 584 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 MAP3K14Q99558 947 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 C19orf44Q9H6X5 657 aa22.72■■□□□ 1.23
RPUSD3-216ENST00000484134 A0A1B0GUL7 405 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 IMMTQ16891 758 aaKnown RBP22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 RESP18Q5W5W9 173 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 DHX58Q96C10 678 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 FAM237AA0A1B0GTK4 181 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 H7C1W4 665 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 SNRPA1P09661 255 aaKnown RBP22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 MUM1L1Q5H9M0 696 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 DESI2Q9BSY9 194 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 ARFGAP3Q9NP61 516 aa22.71■■□□□ 1.23
RPUSD3-216ENST00000484134 OLFM4Q6UX06 510 aa22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 TICAM2Q86XR7 235 aa22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 PUS3Q9BZE2 481 aaKnown RBP22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 IRX2Q9BZI1 471 aaPredicted RBP22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 PPP6R2O75170 966 aa22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 IL15P40933 162 aaPredicted RBP22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 WASHC4Q2M389 1173 aa22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 ALG1Q9BT22 464 aa22.7■■□□□ 1.22
RPUSD3-216ENST00000484134 H3BQF6 201 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 KRT40Q6A162 431 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 RABGGTAQ92696 567 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 ARFGEF2Q9Y6D5 1785 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 STX10O60499 249 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 RXRAP19793 462 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 KARSQ15046 597 aaKnown RBP22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 LMOD2Q6P5Q4 547 aa22.69■■□□□ 1.22
RPUSD3-216ENST00000484134 MDM2Q00987 491 aaPredicted RBP22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 FMR1Q06787 632 aaKnown RBP eCLIP22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 MTF1Q14872 753 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 PUS7LQ9H0K6 701 aaKnown RBP22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 EYA2O00167 538 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 SPECC1Q5M775 1068 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 PLBD2Q8NHP8 589 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 NCOA7Q8NI08 942 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 MRPL44Q9H9J2 332 aaKnown RBP22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 KCNH3Q9ULD8 1083 aa22.68■■□□□ 1.22
RPUSD3-216ENST00000484134 C4AP0C0L4 1744 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 C4BP0C0L5 1744 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 PHKG2P15735 406 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 ZSCAN26Q16670 478 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 LONRF2Q1L5Z9 754 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 CCDC102BQ68D86 513 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 CNNM3Q8NE01 707 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 PHKBQ93100 1093 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 NBPF3Q9H094 633 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 ZSWIM4Q9H7M6 989 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 ADAM21Q9UKJ8 722 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 UBE2Q2LH0YL09 131 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 ADORA1P30542 326 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 MED15Q96RN5 788 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 SENP2Q9HC62 589 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 LCMT1Q9UIC8 334 aa22.67■■□□□ 1.22
RPUSD3-216ENST00000484134 GOLGA6L9A6NEM1 432 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 MYO1BO43795 1136 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 ZNF18P17022 549 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 SCARF1Q14162 830 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 SPECC1LQ69YQ0 1117 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 ZBTB9Q96C00 473 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 SCN11AQ9UI33 1791 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 CAMTA1Q9Y6Y1 1673 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 A0A0U1RQJ8 604 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 TXLNAP40222 546 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 RALYLQ86SE5 291 aaKnown RBP22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 JMYQ8N9B5 988 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 ATRIPQ8WXE1 791 aa22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 DDX60Q8IY21 1712 aaKnown RBP22.66■■□□□ 1.22
RPUSD3-216ENST00000484134 LMTK3Q96Q04 1460 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 TMEM94Q12767 1356 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 TRMT44Q8IYL2 757 aaKnown RBP22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 GOLGA1Q92805 767 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 MAN1B1Q9UKM7 699 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 NFE2L3Q9Y4A8 694 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 CPDO75976 1380 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 GPS2Q13227 327 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 ZNF827Q17R98 1081 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
RPUSD3-216ENST00000484134 MAP2K7O14733 419 aa22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 CYB5R4Q7L1T6 521 aa22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 CCDC12Q8WUD4 166 aaPredicted RBP22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 ZMYM6O95789 1325 aa22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 SLIT3O75094 1523 aa22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 ZNF213O14771 459 aa22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 CUTAO60888 179 aa22.64■■□□□ 1.21
RPUSD3-216ENST00000484134 PI16Q6UXB8 463 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms